RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 PUF60Q9UHX1 559 aaKnown RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 PCDHGC3Q9UN70 934 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 REXO2Q9Y3B8 237 aaKnown RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 ANKRD62A6NC57 917 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 ZNF263O14978 683 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 ALDH2P05091 517 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 MYBL1P10243 752 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 ODC1P11926 461 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 WARSP23381 471 aaKnown RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 AARSP49588 968 aaKnown RBP eCLIP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 RAD23BP54727 409 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 CDH8P55286 799 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 FMO1Q01740 532 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 CLLU1OSQ5K130 101 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 SCARA3Q6AZY7 606 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 NYAP1Q6ZVC0 841 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 TMEM35BQ8NCS4 154 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 OR6B3Q8NGW1 331 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 LNX1Q8TBB1 728 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 CTNNBL1Q8WYA6 563 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 ELMO3Q96BJ8 720 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 VCPIP1Q96JH7 1222 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 HEXIM2Q96MH2 286 aaKnown RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 TMEM175Q9BSA9 504 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 COLEC11Q9BWP8 271 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 LHX5Q9H2C1 402 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 IL23AQ9NPF7 189 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 LZTFL1Q9NQ48 299 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 TBC1D13Q9NVG8 400 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 NENFQ9UMX5 172 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 TTC3P53804 2025 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 TDRD15B5MCY1 1934 aaKnown RBP11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 A0A0A6YYK5 440 aaPredicted RBP11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 A8MXQ7 604 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 PPEF2O14830 753 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 MMEP08473 750 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 TMEM253P0C7T8 217 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 FGFR1P11362 822 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 CD19P15391 556 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 CHRNB2P17787 502 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 NSFP46459 744 aaKnown RBP11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 AFF1P51825 1210 aaKnown RBP11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 NDST1P52848 882 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 SNX16P57768 344 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 CNGA2Q16280 664 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 SGO2Q562F6 1265 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 DNTTIP2Q5QJE6 756 aaKnown RBP11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 TAF3Q5VWG9 929 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 ACAD10Q6JQN1 1059 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 COLGALT2Q8IYK4 626 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 CRYBG2Q8N1P7 616 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 SLC4A11Q8NBS3 891 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 MSANTD4Q8NCY6 345 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 SLC20A1Q8WUM9 679 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 TOP1MTQ969P6 601 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 SENP8Q96LD8 212 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 CASD1Q96PB1 797 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 MIS12Q9H081 205 aa11.25□□□□□ -0.61
NEDD4L-224ENST00000588712 CASTOR2A6NHX0 329 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 USP27XA6NNY8 438 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 CYP1A1P04798 512 aaPredicted RBP11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 CSF2RAP15509 400 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 RAP1GAPP47736 663 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 ETF1P62495 437 aaKnown RBP11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 CLEC16AQ2KHT3 1053 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 ZNF394Q53GI3 561 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 GPIHBP1Q8IV16 184 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 RHOT2Q8IXI1 618 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 ADGRF2Q8IZF7 708 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 LRRC43Q8N309 656 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 C17orf53Q8N3J3 647 aaPredicted RBP11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 WHAMMQ8TF30 809 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 SECISBP2LQ93073 1101 aaKnown RBP11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 NOX5Q96PH1 765 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 ALS2CR12Q96Q35 445 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 SDCBP2Q9H190 292 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 RNF19AQ9NV58 838 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 STXBP5LQ9Y2K9 1186 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 SCN1AP35498 2009 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 M0QZQ0 153 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 SPTLC1O15269 473 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 FTLP02792 175 aaPredicted RBP11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 CYP11A1P05108 521 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 UNGP13051 313 aaPredicted RBP11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 TYMPP19971 482 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 PCSK1P29120 753 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 GPC5P78333 572 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 CENPCQ03188 943 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 FPGSQ05932 587 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 ELAVL2Q12926 359 aaKnown RBP11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 THEM5Q8N1Q8 247 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 PDCL2Q8N4E4 241 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 SUSD3Q96L08 255 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 ELOVL4Q9GZR5 314 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 GUCA1BQ9UMX6 200 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 SCN5AQ14524 2016 aa11.24□□□□□ -0.61
NEDD4L-224ENST00000588712 TBKBP1A7MCY6 615 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 GABRDO14764 452 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms