RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 ZFXP17010 805 aaPredicted RBP4.31□□□□□ -1.72
VPS4B-203ENST00000588323 TUBA4AP68366 448 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 TLE1Q04724 770 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 IL10RAQ13651 578 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 KRT26Q7Z3Y9 468 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 JADE3Q92613 823 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 SCAMP4Q969E2 229 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 RPL36ALQ969Q0 106 aaKnown RBP4.31□□□□□ -1.72
VPS4B-203ENST00000588323 MRGPRX4Q96LA9 322 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 FCRL4Q96PJ5 515 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 VKORC1Q9BQB6 163 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 ACTRT3Q9BYD9 372 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 MAN1C1Q9NR34 630 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 TMA7Q9Y2S6 64 aaKnown RBP4.31□□□□□ -1.72
VPS4B-203ENST00000588323 IPPQ9Y573 584 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 HTRA2O43464 458 aaPredicted RBP4.3□□□□□ -1.72
VPS4B-203ENST00000588323 CLSTN1O94985 981 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 IGKV2-30P06310 120 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 GNAI3P08754 354 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 VIL1P09327 827 aaKnown RBP4.3□□□□□ -1.72
VPS4B-203ENST00000588323 NDUFB7P17568 137 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 C5AR1P21730 350 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 EPHB2P29323 1055 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 GNAI1P63096 354 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 BMPR2Q13873 1038 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 KLF9Q13886 244 aaPredicted RBP4.3□□□□□ -1.72
VPS4B-203ENST00000588323 TBCCQ15814 346 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 C3orf36Q3SXR2 165 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 SLC44A4Q53GD3 710 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 C11orf87Q6NUJ2 197 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 CEP85Q6P2H3 762 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 ZNF551Q7Z340 670 aaPredicted RBP4.3□□□□□ -1.72
VPS4B-203ENST00000588323 PDSS2Q86YH6 399 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 CNTD1Q8N815 330 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 ZBTB9Q96C00 473 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 AMBRA1Q9C0C7 1298 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 BRD9Q9H8M2 597 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 SERTAD4Q9NUC0 356 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 SERGEFQ9UGK8 458 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 LIMCH1Q9UPQ0 1083 aa4.3□□□□□ -1.72
VPS4B-203ENST00000588323 ZNF521Q96K83 1311 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 ANKRD62A6NC57 917 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 CCDC154A6NI56 674 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 ZNF785A8K8V0 405 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 NXPH3O95157 252 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 CHEK2O96017 543 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 ITGALP20701 1170 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 CERS1P27544 350 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 CYP2C19P33261 490 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 PSMC1P62191 440 aaKnown RBP4.29□□□□□ -1.72
VPS4B-203ENST00000588323 ETFDHQ16134 617 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 CCDC93Q567U6 631 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 TEDDM1Q5T9Z0 273 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 MORN5Q5VZ52 161 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 SDE2Q6IQ49 451 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 YTHDF3Q7Z739 585 aaKnown RBP4.29□□□□□ -1.72
VPS4B-203ENST00000588323 NEK8Q86SG6 692 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 PSD4Q8NDX1 1056 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 ATRIPQ8WXE1 791 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 KAT5Q92993 513 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 CNPPD1Q9BV87 410 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 BHMT2Q9H2M3 363 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 GNL3LQ9NVN8 582 aaKnown RBP4.29□□□□□ -1.72
VPS4B-203ENST00000588323 SH3BP4Q9P0V3 963 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 DKK3Q9UBP4 350 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 TBC1D30Q9Y2I9 924 aa4.29□□□□□ -1.72
VPS4B-203ENST00000588323 PHLDB1Q86UU1 1377 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 RB1CC1Q8TDY2 1594 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 KLHL33A6NCF5 533 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 XPOTO43592 962 aaKnown RBP4.28□□□□□ -1.72
VPS4B-203ENST00000588323 SOAT2O75908 522 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 JTBO76095 146 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 LATS1O95835 1130 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 GJB1P08034 283 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 FAM163BP0C2L3 166 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 LPOP22079 712 aaPredicted RBP4.28□□□□□ -1.72
VPS4B-203ENST00000588323 EDNRBP24530 442 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 MPGP29372 298 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 CD6P30203 668 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 IARSP41252 1262 aaKnown RBP4.28□□□□□ -1.72
VPS4B-203ENST00000588323 PROSER3Q2NL68 480 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 RBM20Q5T481 1227 aaKnown RBP4.28□□□□□ -1.72
VPS4B-203ENST00000588323 SLC9A4Q6AI14 798 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 TAF2Q6P1X5 1199 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 ZNF66Q6ZN08 573 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 SLC29A4Q7RTT9 530 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 ANKRD13AQ8IZ07 590 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 C1orf162Q8NEQ5 155 aaPredicted RBP4.28□□□□□ -1.72
VPS4B-203ENST00000588323 DENND1AQ8TEH3 1009 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 FAM136AQ96C01 138 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 PUS7LQ9H0K6 701 aaKnown RBP4.28□□□□□ -1.72
VPS4B-203ENST00000588323 SMOC2Q9H3U7 446 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 ARHGEF3Q9NR81 526 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 RLIMQ9NVW2 624 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 SIDT1Q9NXL6 827 aaKnown RBP4.28□□□□□ -1.72
VPS4B-203ENST00000588323 ETAA1Q9NY74 926 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 SLC5A4Q9NY91 659 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 CFAP97Q9P2B7 532 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 MCM8Q9UJA3 840 aa4.28□□□□□ -1.72
VPS4B-203ENST00000588323 BTBD3Q9Y2F9 522 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms