RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 RPL13P26373 211 aaKnown RBP20.65■□□□□ 0.9
CIRBP-217ENST00000588230 CASP4P49662 377 aa20.65■□□□□ 0.9
CIRBP-217ENST00000588230 UBE2HP62256 183 aa20.65■□□□□ 0.9
CIRBP-217ENST00000588230 GPR17Q13304 367 aa20.65■□□□□ 0.9
CIRBP-217ENST00000588230 ZNF658Q5TYW1 1059 aaPredicted RBP20.65■□□□□ 0.9
CIRBP-217ENST00000588230 GRASPQ7Z6J2 395 aaPredicted RBP20.65■□□□□ 0.9
CIRBP-217ENST00000588230 GTPBP4Q9BZE4 634 aaKnown RBP20.65■□□□□ 0.9
CIRBP-217ENST00000588230 GDAP2Q9NXN4 497 aa20.65■□□□□ 0.9
CIRBP-217ENST00000588230 SNX9Q9Y5X1 595 aa20.65■□□□□ 0.9
CIRBP-217ENST00000588230 NOTCH4Q99466 2003 aa20.65■□□□□ 0.9
CIRBP-217ENST00000588230 PHACTR2O75167 634 aa20.64■□□□□ 0.89
CIRBP-217ENST00000588230 POU2F2P09086 479 aa20.64■□□□□ 0.89
CIRBP-217ENST00000588230 NR2F2P24468 414 aa20.64■□□□□ 0.89
CIRBP-217ENST00000588230 GBP2P32456 591 aaPredicted RBP20.64■□□□□ 0.89
CIRBP-217ENST00000588230 MTMR3Q13615 1198 aa20.64■□□□□ 0.89
CIRBP-217ENST00000588230 UBALD2Q8IYN6 164 aa20.64■□□□□ 0.89
CIRBP-217ENST00000588230 SPATA20Q8TB22 786 aa20.64■□□□□ 0.89
CIRBP-217ENST00000588230 PARD3BQ8TEW8 1205 aa20.64■□□□□ 0.89
CIRBP-217ENST00000588230 PGLYRP2Q96PD5 576 aa20.64■□□□□ 0.89
CIRBP-217ENST00000588230 EPS15L1Q9UBC2 864 aa20.64■□□□□ 0.89
CIRBP-217ENST00000588230 INSL5Q9Y5Q6 135 aa20.64■□□□□ 0.89
CIRBP-217ENST00000588230 KMT2EQ8IZD2 1858 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 FSHRP23945 695 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 PRCPP42785 496 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 AP3M2P53677 418 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 TRPC3Q13507 836 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 NFIL3Q16649 462 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 TMEM86AQ8N2M4 240 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 PDCL2Q8N4E4 241 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 OR10T2Q8NGX3 314 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 PLEKHO2Q8TD55 490 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 ZNF516Q92618 1163 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 PBXIP1Q96AQ6 731 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 TMEM209Q96SK2 561 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 GZF1Q9H116 711 aaPredicted RBP20.63■□□□□ 0.89
CIRBP-217ENST00000588230 L1RE1Q9UN81 338 aa20.63■□□□□ 0.89
CIRBP-217ENST00000588230 LRRIQ3A6PVS8 624 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-217ENST00000588230 CST3P01034 146 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-217ENST00000588230 PDGFBP01127 241 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-217ENST00000588230 NTHL1P78549 312 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 DUSP4Q13115 394 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 ADAM9Q13443 819 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 BIRC3Q13489 604 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 GET4Q7L5D6 327 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-217ENST00000588230 ELMOD1Q8N336 334 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 TOP6BLQ8N6T0 577 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 TMC2Q8TDI7 906 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 RTP3Q9BQQ7 232 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 ZCWPW1Q9H0M4 648 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 KCNK12Q9HB15 430 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 HCFC1R1Q9NWW0 138 aa20.62■□□□□ 0.89
CIRBP-217ENST00000588230 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.62■□□□□ 0.89
CIRBP-217ENST00000588230 DNMT3BQ9UBC3 853 aaKnown RBP20.62■□□□□ 0.89
CIRBP-217ENST00000588230 MAPK13O15264 365 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 PTPN2P17706 415 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 PLA2G5P39877 138 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 CLDN10P78369 228 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 MYL7Q01449 175 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 TSPY1Q01534 308 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 EDRF1Q3B7T1 1238 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 PABPC1LQ4VXU2 614 aaKnown RBP20.61■□□□□ 0.89
CIRBP-217ENST00000588230 SLC39A12Q504Y0 691 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 ZCWPW2Q504Y3 356 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 COBLL1Q53SF7 1204 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 ISM2Q6H9L7 571 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 CENPPQ6IPU0 288 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 DPH6Q7L8W6 267 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 DCP1BQ8IZD4 617 aaKnown RBP20.61■□□□□ 0.89
CIRBP-217ENST00000588230 ATAD1Q8NBU5 361 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 MMS19Q96T76 1030 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 TSG101Q99816 390 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 DDX43Q9NXZ2 648 aaKnown RBP20.61■□□□□ 0.89
CIRBP-217ENST00000588230 MAN1B1Q9UKM7 699 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 TSC2P49815 1807 aa20.61■□□□□ 0.89
CIRBP-217ENST00000588230 MTMR11A4FU01 709 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 AKAP3O75969 853 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 VNN2O95498 520 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 KRT13P13646 458 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 PSMC2P35998 433 aaKnown RBP20.6■□□□□ 0.89
CIRBP-217ENST00000588230 ALDH1A3P47895 512 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 LHX1P48742 406 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 DLG4P78352 724 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 TWF1Q12792 350 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 SMARCB1Q12824 385 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 PLD1Q13393 1074 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 STIM1Q13586 685 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 SOWAHAQ2M3V2 549 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 IQCEQ6IPM2 695 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 INTS8Q75QN2 995 aaKnown RBP20.6■□□□□ 0.89
CIRBP-217ENST00000588230 FAM186BQ8IYM0 893 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 ADGRF2Q8IZF7 708 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 FBXL6Q8N531 539 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 SPATA18Q8TC71 538 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 ZNF512Q96ME7 567 aaPredicted RBP20.6■□□□□ 0.89
CIRBP-217ENST00000588230 SLC27A5Q9Y2P5 690 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 YIPF1Q9Y548 306 aa20.6■□□□□ 0.89
CIRBP-217ENST00000588230 CETN3O15182 167 aa20.59■□□□□ 0.89
CIRBP-217ENST00000588230 CLSTN1O94985 981 aa20.59■□□□□ 0.89
CIRBP-217ENST00000588230 RHOP08100 348 aa20.59■□□□□ 0.89
CIRBP-217ENST00000588230 LAMP2P13473 410 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms