RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 NR1D1P20393 614 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 PAFAH1B1P43034 410 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 EPHB4P54760 987 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 MCL1Q07820 350 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 TCEAL1Q15170 157 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 TAF11Q15544 211 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 DUSP28Q4G0W2 176 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 WDR44Q5JSH3 913 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ANKRD20A2Q5SQ80 823 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ANKRD20A1Q5TYW2 823 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ANKRD20A3Q5VUR7 823 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 SND1Q7KZF4 910 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ERICH1Q86X53 443 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
LINC01539-201ENST00000587904 CREG2Q8IUH2 290 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 RHOT2Q8IXI1 618 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 EPS8L1Q8TE68 723 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 SEC16BQ96JE7 1060 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 KREMEN1Q96MU8 473 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 POP1Q99575 1024 aaKnown RBP10.22□□□□□ -0.77
LINC01539-201ENST00000587904 NDNQ99608 321 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ACO2Q99798 780 aaKnown RBP10.22□□□□□ -0.77
LINC01539-201ENST00000587904 PTPN18Q99952 460 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 TINF2Q9BSI4 451 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ZCWPW1Q9H0M4 648 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 PREBQ9HCU5 417 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ACKR2O00590 384 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 OGTO15294 1046 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 WFS1O76024 890 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 SNAI1O95863 264 aaPredicted RBP10.22□□□□□ -0.77
LINC01539-201ENST00000587904 C4BPAP04003 597 aaKnown RBP10.22□□□□□ -0.77
LINC01539-201ENST00000587904 FAM200BP0CF97 657 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 GZMAP12544 262 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 TNFRSF8P28908 595 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 PIK3CAP42336 1068 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 PHKA2P46019 1235 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 TRPC1P48995 793 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ACOT2P49753 483 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 PDE6CP51160 858 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 GALCP54803 685 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 HADHBP55084 474 aaKnown RBP10.22□□□□□ -0.77
LINC01539-201ENST00000587904 HUNKP57058 714 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 TMEM62Q0P6H9 643 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 CBX3Q13185 183 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 SPRED3Q2MJR0 410 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 IQSEC1Q6DN90 963 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 SLFN11Q7Z7L1 901 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 WDR49Q8IV35 697 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ARHGAP18Q8N392 663 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 LRRC71Q8N4P6 559 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 ARL10Q8N8L6 244 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 LRRC57Q8N9N7 239 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 SMC1BQ8NDV3 1235 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 TPCN2Q8NHX9 752 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 DYDC1Q8WWB3 177 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 CAPZA3Q96KX2 299 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 MMS19Q96T76 1030 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 FAM192AQ9GZU8 254 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 HAPLN2Q9GZV7 340 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 FZD8Q9H461 694 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 PIDD1Q9HB75 910 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 TUBA8Q9NY65 449 aaPredicted RBP10.22□□□□□ -0.77
LINC01539-201ENST00000587904 NOCTQ9UK39 431 aaKnown RBP10.22□□□□□ -0.77
LINC01539-201ENST00000587904 TMED5Q9Y3A6 229 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 LRRC42Q9Y546 428 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 CNTNAP2Q9UHC6 1331 aa10.22□□□□□ -0.77
LINC01539-201ENST00000587904 FAM189A1O60320 539 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 SRGAP2O75044 1071 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 HLA-DRAP01903 254 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 EDN1P05305 212 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 SRGAP2CP0DJJ0 459 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 PROZP22891 400 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 TBXAS1P24557 533 aaPredicted RBP10.21□□□□□ -0.77
LINC01539-201ENST00000587904 TMOD1P28289 359 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 ADCYAP1R1P41586 468 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 BPIFB4P59827 614 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 PTENP60484 403 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 POU5F1Q01860 360 aaKnown RBP10.21□□□□□ -0.77
LINC01539-201ENST00000587904 GUCY1A3Q02108 690 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 FAM187BQ17R55 369 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 CFAP221Q4G0U5 840 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 ANO7Q6IWH7 933 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 CHADLQ6NUI6 762 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 EFCAB12Q6NXP0 572 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 NFRKBQ6P4R8 1299 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 MPZL3Q6UWV2 235 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 ZNF677Q86XU0 584 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 RASAL3Q86YV0 1011 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 RHPN2Q8IUC4 686 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 LINC01465Q8N7H1 131 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 AFG1LQ8WV93 481 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 TAF4BQ92750 862 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 IFT43Q96FT9 208 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 ISCUQ9H1K1 167 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 PRMT7Q9NVM4 692 aaPredicted RBP10.21□□□□□ -0.77
LINC01539-201ENST00000587904 SLC12A4Q9UP95 1085 aa10.21□□□□□ -0.77
LINC01539-201ENST00000587904 MYH10P35580 1976 aa10.21□□□□□ -0.78
LINC01539-201ENST00000587904 KRT38O76015 456 aa10.21□□□□□ -0.78
LINC01539-201ENST00000587904 INSRRP14616 1297 aa10.21□□□□□ -0.78
LINC01539-201ENST00000587904 CDC25CP30307 473 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms