RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	ADGRF2	Q8IZF7	708 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	EHBP1	Q8NDI1	1231 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	LMO3	Q8TAP4	145 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	FAM200A	Q8TCP9	573 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	SLC22A17	Q8WUG5	538 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	HDAC7	Q8WUI4	952 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	SEMA4D	Q92854	862 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	MMS19	Q96T76	1030 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	ACBD6	Q9BR61	282 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	BCO2	Q9BYV7	579 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	NDST4	Q9H3R1	872 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	CYP3A43	Q9HB55	503 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	CBX8	Q9HC52	389 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	NXF1	Q9UBU9	619 aa	Known RBP	13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	LIMA1	Q9UHB6	759 aa	Known RBP	13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	MAFF	Q9ULX9	164 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	CDY1	Q9Y6F8	540 aa		13.21	□□□□□ -0.29
PKN1-208	ENST00000586900	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.21	□□□□□ -0.3
PKN1-208	ENST00000586900	PER2	O15055	1255 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	ABLIM3	O94929	683 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	TPM2	P07951	284 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	RPL17	P18621	184 aa	Known RBP	13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	CDK11B	P21127	795 aa	Known RBP	13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	PCSK1	P29120	753 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	SMARCB1	Q12824	385 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	ADAM15	Q13444	863 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	KRT31	Q15323	416 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	HSP90AA4P	Q58FG1	418 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	TPGS2	Q68CL5	300 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	SMYD5	Q6GMV2	418 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	SPOPL	Q6IQ16	392 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	GBP6	Q6ZN66	633 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	RTL10	Q7L3V2	364 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	TTC39C	Q8N584	583 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	KBTBD7	Q8WVZ9	684 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	PABPC5	Q96DU9	382 aa	Known RBP	13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	RTP3	Q9BQQ7	232 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	PI4K2A	Q9BTU6	479 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	NIF3L1	Q9GZT8	377 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	TSPY26P	Q9H489	355 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	APOBEC3G	Q9HC16	384 aa	Known RBP	13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	DPP7	Q9UHL4	492 aa		13.2	□□□□□ -0.3
PKN1-208	ENST00000586900	ADAM12	O43184	909 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	LRRN2	O75325	713 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	GLUD1	P00367	558 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	SRGAP2B	P0DMP2	458 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	ASPA	P45381	313 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	TPM4	P67936	248 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	ROR1	Q01973	937 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	GPR17	Q13304	367 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	UNC93A	Q86WB7	457 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	OSTM1	Q86WC4	334 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	MICALL1	Q8N3F8	863 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	MAFA	Q8NHW3	353 aa	Predicted RBP	13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	ZNF461	Q8TAF7	563 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	CASP10	Q92851	521 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	ANP32E	Q9BTT0	268 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	ZCWPW1	Q9H0M4	648 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	PLEKHA4	Q9H4M7	779 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	IGFLR1	Q9H665	355 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	DDX43	Q9NXZ2	648 aa	Known RBP	13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	POLI	Q9UNA4	740 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	HCFC2	Q9Y5Z7	792 aa		13.19	□□□□□ -0.3
PKN1-208	ENST00000586900	BRWD1	Q9NSI6	2320 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	WDR27	A2RRH5	827 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	GOLGA6L19	H0YKK7	550 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	TGM5	O43548	720 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	CLSTN1	O94985	981 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	ATF2	P15336	505 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	TBXAS1	P24557	533 aa	Predicted RBP	13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	GNL1	P36915	607 aa	Predicted RBP	13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	COPB1	P53618	953 aa	Known RBP	13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	TSPY1	Q01534	308 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	INCA1	Q0VD86	236 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	CCDC85B	Q15834	202 aa	Predicted RBP	13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	EXOC3L4	Q17RC7	722 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	UVSSA	Q2YD98	709 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	ELMSAN1	Q6PJG2	1045 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	APTX	Q7Z2E3	356 aa	Known RBP	13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	PALB2	Q86YC2	1186 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	DCP1B	Q8IZD4	617 aa	Known RBP	13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	OR10T2	Q8NGX3	314 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	TATDN2	Q93075	761 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	FAM81B	Q96LP2	452 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	NT5C1B	Q96P26	610 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	MRPL45	Q9BRJ2	306 aa	Known RBP	13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	SNX25	Q9H3E2	840 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	SMYD3	Q9H7B4	428 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	DZANK1	Q9NVP4	752 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	TAB2	Q9NYJ8	693 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	GCNT4	Q9P109	453 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	HSFX1	Q9UBD0	423 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	AFF4	Q9UHB7	1163 aa	Known RBP	13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	FBXW11	Q9UKB1	542 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	CDH9	Q9ULB4	789 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	COG5	Q9UP83	839 aa		13.18	□□□□□ -0.3
PKN1-208	ENST00000586900	PLXNA3	P51805	1871 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms