RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 ENPP3O14638 875 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 SMAD3P84022 425 aaKnown RBP5.5□□□□□ -1.53
ZNF540-204ENST00000586792 CD83Q01151 205 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 CCL15Q16663 113 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 RABL3Q5HYI8 236 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 ZSCAN25Q6NSZ9 544 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 RHOUQ7L0Q8 258 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 EEPD1Q7L9B9 569 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 ERO1BQ86YB8 467 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 ZNF276Q8N554 614 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 MAGEB6Q8N7X4 407 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 MIGA1Q8NAN2 632 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.5□□□□□ -1.53
ZNF540-204ENST00000586792 SH3RF2Q8TEC5 729 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 ALG1Q9BT22 464 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 GPR87Q9BY21 358 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 DHX36Q9H2U1 1008 aaKnown RBP5.5□□□□□ -1.53
ZNF540-204ENST00000586792 RNF186Q9NXI6 227 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 SRPK3Q9UPE1 567 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 COL2A1P02458 1487 aaPredicted RBP5.5□□□□□ -1.53
ZNF540-204ENST00000586792 LAMB1P07942 1786 aa5.5□□□□□ -1.53
ZNF540-204ENST00000586792 DOCK1Q14185 1865 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 ERC2O15083 957 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 ABHD16AO95870 558 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 ITGB1P05556 798 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 PDGFRBP09619 1106 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 CETPP11597 493 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 AOAHP28039 575 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 TM4SF4P48230 202 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 HERVK_113P62684 666 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 PPATQ06203 517 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 PPIL2Q13356 520 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 SNAPC2Q13487 334 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 HDAC1Q13547 482 aaPredicted RBP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 MOGSQ13724 837 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 ZRSR2Q15696 482 aaKnown RBP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 FXNQ16595 210 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 ODR4Q5SWX8 454 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 SLC9C2Q5TAH2 1124 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 PAPD7Q5XG87 772 aaKnown RBP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 GRAMD4Q6IC98 578 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 MAPKAPK5Q8IW41 473 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 PROKR1Q8TCW9 393 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 THAP3Q8WTV1 239 aaPredicted RBP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 ZKSCAN4Q969J2 545 aaPredicted RBP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 C8orf48Q96LL4 319 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 CRNKL1Q9BZJ0 848 aaKnown RBP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 OSBPL5Q9H0X9 879 aaPredicted RBP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 OR10A5Q9H207 317 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 BOLA2Q9H3K6 86 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 AS3MTQ9HBK9 375 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 PIH1D3Q9NQM4 214 aaKnown RBP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 ECHDC1Q9NTX5 307 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 PAG1Q9NWQ8 432 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 HERC5Q9UII4 1024 aaKnown RBP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 FBXO9Q9UK97 447 aaPredicted RBP5.49□□□□□ -1.53
ZNF540-204ENST00000586792 VWA7Q9Y334 891 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 ATP23Q9Y6H3 246 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 RFX7Q2KHR2 1363 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 ATRNL1Q5VV63 1379 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 CEP350Q5VT06 3117 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 NAV1Q8NEY1 1877 aa5.49□□□□□ -1.53
ZNF540-204ENST00000586792 FLT1P17948 1338 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 FOCADQ5VW36 1801 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 CCDC189A1A4V9 331 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 GOLGA6L6A8MZA4 724 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 B2RBV5 119 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 PROB1E7EW31 1015 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 B3GALT2O43825 422 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 FAM20BO75063 409 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 ATP5JP18859 108 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 TAP1Q03518 808 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 MYBPC2Q14324 1141 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 KIF22Q14807 665 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 ARHGEF6Q15052 776 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 GPR19Q15760 415 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 ZNF362Q5T0B9 420 aaPredicted RBP5.48□□□□□ -1.53
ZNF540-204ENST00000586792 KANK2Q63ZY3 851 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 ZNF280DQ6N043 979 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 KCNT2Q6UVM3 1135 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 CKAP2LQ8IYA6 745 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 SCYL3Q8IZE3 742 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 TGFBRAP1Q8WUH2 860 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 GCC1Q96CN9 775 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 DCTPP1Q9H773 170 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 IPPKQ9H8X2 491 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 PI4KBQ9UBF8 816 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 COX11Q9Y6N1 276 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 RPS6KL1Q9Y6S9 549 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 ATAD5Q96QE3 1844 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 TTC41PQ6P2S7 1318 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 ZNF532Q9HCE3 1301 aa5.48□□□□□ -1.53
ZNF540-204ENST00000586792 MYO5AQ9Y4I1 1855 aaKnown RBP5.47□□□□□ -1.53
ZNF540-204ENST00000586792 COL4A3Q01955 1670 aa5.47□□□□□ -1.53
ZNF540-204ENST00000586792 MYH7P12883 1935 aa5.47□□□□□ -1.53
ZNF540-204ENST00000586792 A0A1W2PQU0 124 aa5.47□□□□□ -1.53
ZNF540-204ENST00000586792 TCRBV5S4A2TA0A5A2 114 aa5.47□□□□□ -1.53
ZNF540-204ENST00000586792 DDTLA6NHG4 134 aaPredicted RBP5.47□□□□□ -1.53
ZNF540-204ENST00000586792 SMAD7O15105 426 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms