RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 PLXDC1Q8IUK5 500 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 SIAH1Q8IUQ4 282 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 YAF2Q8IY57 180 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 SCAMP5Q8TAC9 235 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 CSGALNACT1Q8TDX6 532 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 ZNF384Q8TF68 577 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 TMEM209Q96SK2 561 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 SDF4Q9BRK5 362 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 PCDHAC1Q9H158 963 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 PABPC3Q9H361 631 aaKnown RBP7.35□□□□□ -1.23
TPM4-203ENST00000586193 TAF1DQ9H5J8 278 aaPredicted RBP7.35□□□□□ -1.23
TPM4-203ENST00000586193 SEPSECSQ9HD40 501 aaKnown RBP7.35□□□□□ -1.23
TPM4-203ENST00000586193 HEYLQ9NQ87 328 aaPredicted RBP7.35□□□□□ -1.23
TPM4-203ENST00000586193 TPSG1Q9NRR2 321 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 ANKEF1Q9NU02 776 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 TMEM160Q9NX00 188 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 ZMYND8Q9ULU4 1186 aaPredicted RBP7.35□□□□□ -1.23
TPM4-203ENST00000586193 ARHGAP26Q9UNA1 814 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 SLC5A6Q9Y289 635 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 MTO1Q9Y2Z2 717 aaKnown RBP7.35□□□□□ -1.23
TPM4-203ENST00000586193 GRIN2AQ12879 1464 aa7.35□□□□□ -1.23
TPM4-203ENST00000586193 A0A087WWL8 130 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 A0A087X0M5 115 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 A0A1B0GX30 115 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 KLHL18O94889 574 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 GASTP01350 101 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 C8BP07358 591 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 GJB1P08034 283 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 IL2RBP14784 551 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 ALOX15P16050 662 aaPredicted RBP7.34□□□□□ -1.23
TPM4-203ENST00000586193 NPPBP16860 134 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 RXRAP19793 462 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 KRT20P35900 424 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 ALDH1A3P47895 512 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 WNT3AP56704 352 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 ZNF200P98182 395 aaPredicted RBP7.34□□□□□ -1.23
TPM4-203ENST00000586193 CCNG2Q16589 344 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 MAPKAPK3Q16644 382 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 MSMPQ1L6U9 139 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 PABPC1LQ4VXU2 614 aaKnown RBP7.34□□□□□ -1.23
TPM4-203ENST00000586193 FAM133BQ5BKY9 247 aaKnown RBP7.34□□□□□ -1.23
TPM4-203ENST00000586193 PRAMEF14Q5SWL7 426 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 RAP1GAP2Q684P5 730 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 HAUS3Q68CZ6 603 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 ZC3H14Q6PJT7 736 aaKnown RBP7.34□□□□□ -1.23
TPM4-203ENST00000586193 BRINP3Q76B58 766 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 KRT28Q7Z3Y7 464 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 WFDC3Q8IUB2 231 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 TSPYL6Q8N831 410 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 MYLIPQ8WY64 445 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 THAP4Q8WY91 577 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 SPSB4Q96A44 273 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 ZSWIM3Q96MP5 696 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 MYOCQ99972 504 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 DDX23Q9BUQ8 820 aaKnown RBP7.34□□□□□ -1.23
TPM4-203ENST00000586193 LPAR3Q9UBY5 353 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 TBC1D30Q9Y2I9 924 aa7.34□□□□□ -1.23
TPM4-203ENST00000586193 A0A1W2PRQ8 180 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 MYO1CO00159 1063 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 RAB27BO00194 218 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 KCNQ3O43525 872 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 ZBED4O75132 1171 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 DNAJB5O75953 348 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 GRPP07492 148 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 EGR1P18146 543 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 LORP23490 312 aaPredicted RBP7.33□□□□□ -1.24
TPM4-203ENST00000586193 GDNFP39905 211 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 AARSP49588 968 aaKnown RBP eCLIP7.33□□□□□ -1.24
TPM4-203ENST00000586193 ATXN1P54253 815 aaKnown RBP7.33□□□□□ -1.24
TPM4-203ENST00000586193 NAP1L1P55209 391 aaKnown RBP7.33□□□□□ -1.24
TPM4-203ENST00000586193 CASP6P55212 293 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 PSMC1P62191 440 aaKnown RBP7.33□□□□□ -1.24
TPM4-203ENST00000586193 AP2B1P63010 937 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 FSTL1Q12841 308 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 ATP2B3Q16720 1220 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 SPECC1Q5M775 1068 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 ADGRF1Q5T601 910 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 C1QTNF12Q5T7M4 302 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 FAM205BPQ63HN1 556 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 ZDHHC24Q6UX98 284 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 STK32CQ86UX6 486 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 IL17RDQ8NFM7 739 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 MDM1Q8TC05 714 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 RFFLQ8WZ73 363 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 ZUFSPQ96AP4 578 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 AGXT2Q9BYV1 514 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 PAIP1Q9H074 479 aaKnown RBP7.33□□□□□ -1.24
TPM4-203ENST00000586193 KLHL14Q9P2G3 628 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 ORC3Q9UBD5 711 aaPredicted RBP7.33□□□□□ -1.24
TPM4-203ENST00000586193 FBXO10Q9UK96 956 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 GPR34Q9UPC5 381 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 FHAD1B1AJZ9 1412 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 CEP170Q5SW79 1584 aa7.33□□□□□ -1.24
TPM4-203ENST00000586193 ERICH3Q5RHP9 1530 aa7.32□□□□□ -1.24
TPM4-203ENST00000586193 F5H0A9 414 aaPredicted RBP7.32□□□□□ -1.24
TPM4-203ENST00000586193 DNPH1O43598 174 aa7.32□□□□□ -1.24
TPM4-203ENST00000586193 USO1O60763 962 aaKnown RBP7.32□□□□□ -1.24
TPM4-203ENST00000586193 GNAI2P04899 355 aa7.32□□□□□ -1.24
TPM4-203ENST00000586193 RAP2AP10114 183 aa7.32□□□□□ -1.24
TPM4-203ENST00000586193 MTHFD1P11586 935 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms