RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 HSPA1AP0DMV8 641 aaKnown RBP6.59□□□□□ -1.35
LIG3-206ENST00000586058 HSPA1BP0DMV9 641 aaKnown RBP6.59□□□□□ -1.35
LIG3-206ENST00000586058 COL6A1P12109 1028 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 RPL9P32969 192 aaKnown RBP6.59□□□□□ -1.35
LIG3-206ENST00000586058 ASPAP45381 313 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 LBX1P52954 281 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 WNT7BP56706 349 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 GPC5P78333 572 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 CLUL1Q15846 466 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 ZNF394Q53GI3 561 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 SGO2Q562F6 1265 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 ODF2Q5BJF6 829 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 UBXN11Q5T124 520 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 C9orf57Q5W0N0 161 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 CCDC70Q6NSX1 233 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 DSTYKQ6XUX3 929 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 SLC39A5Q6ZMH5 540 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 DPH6Q7L8W6 267 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 NECAB2Q7Z6G3 386 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 NOP9Q86U38 636 aaKnown RBP6.59□□□□□ -1.35
LIG3-206ENST00000586058 SLC47A2Q86VL8 602 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 UNC93AQ86WB7 457 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 TMEM86AQ8N2M4 240 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 SLC35F6Q8N357 371 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 ZNF454Q8N9F8 522 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 SMG8Q8ND04 991 aaKnown RBP6.59□□□□□ -1.35
LIG3-206ENST00000586058 OR6B3Q8NGW1 331 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 KAT5Q92993 513 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 WNT8BQ93098 351 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 ARMC5Q96C12 935 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 KCTD12Q96CX2 325 aaKnown RBP6.59□□□□□ -1.35
LIG3-206ENST00000586058 TMEM176AQ96HP8 235 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 TOX2Q96NM4 488 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 ARID3AQ99856 593 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 BCO2Q9BYV7 579 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 ZNF518BQ9C0D4 1074 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 GPR88Q9GZN0 384 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 CTTNBP2NLQ9P2B4 639 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 TUBGCP4Q9UGJ1 667 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 DSEQ9UL01 958 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 BARX2Q9UMQ3 279 aaPredicted RBP6.59□□□□□ -1.35
LIG3-206ENST00000586058 VPS9D1Q9Y2B5 631 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 JRKLQ9Y4A0 524 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 PCDHB7Q9Y5E2 793 aa6.59□□□□□ -1.35
LIG3-206ENST00000586058 PTPRSQ13332 1948 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 ARL5CA6NH57 179 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 M0QYV0 167 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 DDX3XO00571 662 aaKnown RBP eCLIP6.58□□□□□ -1.36
LIG3-206ENST00000586058 PODXLO00592 558 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 TRAPPC3O43617 180 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 BUB1O43683 1085 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 EFCAB14O75071 495 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 CILPO75339 1184 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 MOCS3O95396 460 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 CST3P01034 146 aaPredicted RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 FTLP02792 175 aaPredicted RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 MMEP08473 750 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 VDRP11473 427 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 TCP1P17987 556 aaKnown RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 LRPAP1P30533 357 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 GJA8P48165 433 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 CDK7P50613 346 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 SCNN1GP51170 649 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 GALCP54803 685 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 TUBB4BP68371 445 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 FMO1Q01740 532 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 CENPCQ03188 943 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 TAP1Q03518 808 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 INCA1Q0VD86 236 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 TUSC3Q13454 348 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 CLEC16AQ2KHT3 1053 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 TRIM71Q2Q1W2 868 aaKnown RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 ASTE1Q2TB18 679 aaPredicted RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 TRIM60Q495X7 471 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 C1orf53Q5VUE5 145 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 ACAD10Q6JQN1 1059 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 DPY19L2P1Q6NXN4 242 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 ANKRD33Q7Z3H0 272 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 PEX26Q7Z412 305 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 MRPL10Q7Z7H8 261 aaKnown RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 DAAM2Q86T65 1068 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 ECHDC2Q86YB7 292 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 ADGRF2Q8IZF7 708 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 TOP6BLQ8N6T0 577 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 UBL4BQ8N7F7 174 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 CEP112Q8N8E3 955 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 LNX1Q8TBB1 728 aaPredicted RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 SPATA18Q8TC71 538 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 SLC20A1Q8WUM9 679 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 HEXIM2Q96MH2 286 aaKnown RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 ZFP42Q96MM3 310 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 GAD1Q99259 594 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 SELENOOQ9BVL4 669 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 PPP1R12CQ9BZL4 782 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 XYLT2Q9H1B5 865 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 ELAC1Q9H777 363 aaKnown RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 SMYD3Q9H7B4 428 aa6.58□□□□□ -1.36
LIG3-206ENST00000586058 AGO3Q9H9G7 860 aaKnown RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 APOBEC3GQ9HC16 384 aaKnown RBP6.58□□□□□ -1.36
LIG3-206ENST00000586058 PRDM5Q9NQX1 630 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms