RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 GNL1P36915 607 aaPredicted RBP13.8□□□□□ -0.2
TRIM47-202ENST00000585333 PRKCIP41743 596 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 KLK7P49862 253 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 SLC8A3P57103 927 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 SOWAHAQ2M3V2 549 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 TIGD5Q53EQ6 642 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 C9orf50Q5SZB4 431 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 OVOS1Q6IE37 1185 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 PDE12Q6L8Q7 609 aaKnown RBP13.8□□□□□ -0.2
TRIM47-202ENST00000585333 TMEM270Q6UE05 265 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 SCARA5Q6ZMJ2 495 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 DDX53Q86TM3 631 aaKnown RBP13.8□□□□□ -0.2
TRIM47-202ENST00000585333 TMTC1Q8IUR5 882 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 OR6B3Q8NGW1 331 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 BAP1Q92560 729 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 KREMEN1Q96MU8 473 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 TGS1Q96RS0 853 aaKnown RBP13.8□□□□□ -0.2
TRIM47-202ENST00000585333 ACBD6Q9BR61 282 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 TTPALQ9BTX7 342 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 CDH9Q9ULB4 789 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 RANBP2P49792 3224 aaKnown RBP13.79□□□□□ -0.2
TRIM47-202ENST00000585333 SSU72P8A0A1W2PR75 194 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 C5orf67F2Z3F1 127 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 GABRDO14764 452 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 PPEF2O14830 753 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 LRRN2O75325 713 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 OAZ2O95190 189 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 SOD2P04179 222 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 URODP06132 367 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 WEE2P0C1S8 567 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 CD58P19256 250 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 FGFR3P22607 806 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 CTNNB1P35222 781 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 BMPR1AP36894 532 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 FXR1P51114 621 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM47-202ENST00000585333 SNX16P57768 344 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 SMAD3P84022 425 aaKnown RBP13.79□□□□□ -0.2
TRIM47-202ENST00000585333 KLHL30Q0D2K2 578 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 TDRD12Q587J7 1177 aaKnown RBP13.79□□□□□ -0.2
TRIM47-202ENST00000585333 FAM171A1Q5VUB5 890 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 DPY19L2P1Q6NXN4 242 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 CYP26C1Q6V0L0 522 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 TRIM72Q6ZMU5 477 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 DCP1BQ8IZD4 617 aaKnown RBP13.79□□□□□ -0.2
TRIM47-202ENST00000585333 RBBP8NLQ8NC74 664 aaPredicted RBP13.79□□□□□ -0.2
TRIM47-202ENST00000585333 TMEM176AQ96HP8 235 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 PAAF1Q9BRP4 392 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 HERC2P3Q9BVR0 1158 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 DEF6Q9H4E7 631 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 L1RE1Q9UN81 338 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 POLIQ9UNA4 740 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 STXBP5LQ9Y2K9 1186 aa13.79□□□□□ -0.2
TRIM47-202ENST00000585333 FOXN3O00409 490 aaPredicted RBP13.78□□□□□ -0.2
TRIM47-202ENST00000585333 EPHB6O15197 1021 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 SPTLC1O15269 473 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 VDRP11473 427 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 ACO1P21399 889 aaKnown RBP13.78□□□□□ -0.2
TRIM47-202ENST00000585333 GNA15P30679 374 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 CYLC1P35663 651 aaPredicted RBP13.78□□□□□ -0.2
TRIM47-202ENST00000585333 GLUD2P49448 558 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 NFE2Q16621 373 aaPredicted RBP13.78□□□□□ -0.2
TRIM47-202ENST00000585333 SGO2Q562F6 1265 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 WSCD1Q658N2 575 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 C4orf50Q6ZRC1 276 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 CCDC186Q7Z3E2 898 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 CCDC170Q8IYT3 715 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 CRYBG2Q8N1P7 616 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 UBR7Q8N806 425 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 TC2NQ8N9U0 490 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 MSANTD4Q8NCY6 345 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 C3orf58Q8NDZ4 430 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 C2orf15Q8WU43 125 aaKnown RBP13.78□□□□□ -0.2
TRIM47-202ENST00000585333 PIK3R5Q8WYR1 880 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 TRIM44Q96DX7 344 aaPredicted RBP13.78□□□□□ -0.2
TRIM47-202ENST00000585333 FAM84AQ96KN4 292 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 MIS12Q9H081 205 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 LMAN2LQ9H0V9 348 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 PDCL3Q9H2J4 239 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 SLC28A3Q9HAS3 691 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRIM47-202ENST00000585333 MARCH5Q9NX47 278 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 DDX43Q9NXZ2 648 aaKnown RBP13.78□□□□□ -0.2
TRIM47-202ENST00000585333 MAFFQ9ULX9 164 aa13.78□□□□□ -0.2
TRIM47-202ENST00000585333 LINC01553A4QN01 128 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 FGF18O76093 207 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 BRCC3P46736 316 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 ZNF132P52740 706 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 NDST1P52848 882 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 ADKP55263 362 aaKnown RBP13.77□□□□□ -0.21
TRIM47-202ENST00000585333 GJB7Q6PEY0 223 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 ELMSAN1Q6PJG2 1045 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 TMCO2Q7Z6W1 182 aaPredicted RBP13.77□□□□□ -0.21
TRIM47-202ENST00000585333 CEP57Q86XR8 500 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 HASPINQ8TF76 798 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 CCDC42Q96M95 316 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 NOX5Q96PH1 765 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 ARID3AQ99856 593 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 BAG1Q99933 345 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms