RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 GPR15P49685 360 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 BTKQ06187 659 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 TAF7Q15545 349 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 UGT8Q16880 541 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 C4orf46Q504U0 113 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PRR16Q569H4 304 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 MIIPQ5JXC2 388 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PRR31Q5SQ13 230 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 NXNQ6DKJ4 435 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 CCDC62Q6P9F0 684 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 KIAA1958Q8N8K9 716 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SPATA5Q8NB90 893 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PJA1Q8NG27 643 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 CAGE1Q8TC20 777 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 ARHGAP45Q92619 1136 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 DPF3Q92784 378 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 ACAP3Q96P50 834 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PLEKHG4BQ96PX9 1271 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 OR14A2Q96R54 314 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 HERPUD2Q9BSE4 406 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 MAF1Q9H063 256 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 QRSL1Q9H0R6 528 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 EMC7Q9NPA0 242 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PLCB1Q9NQ66 1216 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 GPRC5CQ9NQ84 441 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 EDARQ9UNE0 448 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PDE4DIPQ5VU43 2346 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PTPRCP08575 1304 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 KIF16BQ96L93 1317 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 COL4A5P29400 1685 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 CFAP69A5D8W1 941 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PRR5-ARHGAP8B1AHC4 643 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 WNT9AO14904 365 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 RPS6KA4O75676 772 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 KNG1P01042 644 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SNRPA1P09661 255 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 COL6A2P12110 1019 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 RPL17P18621 184 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SMARCA1P28370 1054 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PPP2R1AP30153 589 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PER3P56645 1201 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 CCT2P78371 535 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 IRX6P78412 446 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 GRIN1Q05586 938 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 DBPQ10586 325 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PDE1CQ14123 709 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SF1Q15637 639 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 DCAF17Q5H9S7 520 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 TOR2AQ5JU69 321 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 BROXQ5VW32 411 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 FRMD7Q6ZUT3 714 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 ESPNLQ6ZVH7 1005 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 UBE2Q1Q7Z7E8 422 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 DAAM2Q86T65 1068 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 EFHBQ8N7U6 833 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 KREMEN2Q8NCW0 462 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 UBE2Q2Q8WVN8 375 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 OSBPL6Q9BZF3 934 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC12A5Q9H2X9 1139 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SPTLC3Q9NUV7 552 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 KCMF1Q9P0J7 381 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PPP4R1LQ9P1A2 415 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 FBXO2Q9UK22 296 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SRPK3Q9UPE1 567 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 MORC2Q9Y6X9 1032 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 KCNK3O14649 394 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 GABRDO14764 452 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC26A4O43511 780 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 LRG1P02750 347 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 SETSIPP0DME0 302 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 OSMP13725 252 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 CCT5P48643 541 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 TOP3AQ13472 1001 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 GRM3Q14832 879 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 CR1LQ2VPA4 569 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PPP4R3AQ6IN85 833 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 B3GNT9Q6UX72 402 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PALM2Q8IXS6 379 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 TBCBQ99426 244 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 FOXB1Q99853 325 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 ADI1Q9BV57 179 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 RTFDC1Q9BY42 306 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 B4GALT6Q9UBX8 382 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 ST6GALNAC2Q9UJ37 374 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 FBXO9Q9UK97 447 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 PCDHGB6Q9Y5F9 930 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 TNKSO95271 1327 aa2.22□□□□□ -2.05
SMCHD1-211ENST00000584897 RHPN2P1A8MT19 583 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 TEX33O43247 280 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 AKAP8O43823 692 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 NBNO60934 754 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 ZKSCAN1P17029 563 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 FPR2P25090 351 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 PLCD1P51178 756 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CACNB3P54284 484 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 GRM7Q14831 915 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 AGBL4Q5VU57 503 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC30Q5VVM6 783 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 PRAMEF9Q5VWM5 478 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 FOXR2Q6PJQ5 311 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms