RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 FDPSP14324 419 aaKnown RBP13.62□□□□□ -0.23
RNF43-208ENST00000584437 NCOA4Q13772 614 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 LUZP2Q86TE4 346 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 ZNF786Q8N393 782 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 AGAP3Q96P47 875 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 MAP3K14Q99558 947 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 GOLPH3Q9H4A6 298 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 HERC5Q9UII4 1024 aaKnown RBP13.62□□□□□ -0.23
RNF43-208ENST00000584437 NCOA3Q9Y6Q9 1424 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 FKBP9O95302 570 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 LCP1P13796 627 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 PTPN4P29074 926 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
RNF43-208ENST00000584437 VCPP55072 806 aaKnown RBP13.62□□□□□ -0.23
RNF43-208ENST00000584437 ARHGEF6Q15052 776 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 CENPPQ6IPU0 288 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 FKBP9P1Q75LS8 142 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 ZNF507Q8TCN5 953 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 SPON2Q9BUD6 331 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 RXFP1Q9HBX9 757 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 NAGPAQ9UK23 515 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 TNPO2O14787 897 aaKnown RBP13.62□□□□□ -0.23
RNF43-208ENST00000584437 PSTPIP1O43586 416 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 MOCS2O96007 188 aaPredicted RBP13.62□□□□□ -0.23
RNF43-208ENST00000584437 HIST1H2AGP0C0S8 130 aaPredicted RBP13.62□□□□□ -0.23
RNF43-208ENST00000584437 HIST1H2ADP20671 130 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 NNMTP40261 264 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 KLK7P49862 253 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 UBE3AQ05086 875 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 ATG9AQ7Z3C6 839 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 SHCBP1Q8NEM2 672 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 FEZF2Q8TBJ5 459 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 HIST1H2AHQ96KK5 128 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 HIST1H2AJQ99878 128 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 H2AFJQ9BTM1 129 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 EFCAB1Q9HAE3 211 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 LZTS3O60299 673 aaPredicted RBP13.61□□□□□ -0.23
RNF43-208ENST00000584437 TTLL4Q14679 1199 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 WASHC2DQ5SRD0 308 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 ELMSAN1Q6PJG2 1045 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 RTKN2Q8IZC4 609 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 ZNF512BQ96KM6 892 aaPredicted RBP13.61□□□□□ -0.23
RNF43-208ENST00000584437 AFF4Q9UHB7 1163 aaKnown RBP13.61□□□□□ -0.23
RNF43-208ENST00000584437 CLPTM1O96005 669 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 MYBP10242 640 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 BLVRAP53004 296 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 ATXN3P54252 364 aaPredicted RBP13.61□□□□□ -0.23
RNF43-208ENST00000584437 RBP5P82980 135 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 TRMT5Q32P41 509 aaKnown RBP13.61□□□□□ -0.23
RNF43-208ENST00000584437 CIAPIN1Q6FI81 312 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 LRRC6Q86X45 466 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 CCNJLQ8IV13 435 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 CCDC103Q8IW40 242 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 KLHL4Q9C0H6 718 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.61□□□□□ -0.23
RNF43-208ENST00000584437 H3BQF6 201 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 PRKCBP05771 671 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 SSTR3P32745 418 aaPredicted RBP13.61□□□□□ -0.23
RNF43-208ENST00000584437 CSTF3Q12996 717 aaKnown RBP13.61□□□□□ -0.23
RNF43-208ENST00000584437 SCARF1Q14162 830 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 SPDYAQ5MJ70 313 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 LMBRD2Q68DH5 695 aaPredicted RBP13.61□□□□□ -0.23
RNF43-208ENST00000584437 EPS8L3Q8TE67 593 aaKnown RBP13.61□□□□□ -0.23
RNF43-208ENST00000584437 FAM111AQ96PZ2 611 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 EPS8L2Q9H6S3 715 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 RALAP11233 206 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 MTFR1Q15390 333 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 XKR3Q5GH77 459 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 SFMBT1Q9UHJ3 866 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 RAB14P61106 215 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 PTK6Q13882 451 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 ATPAF2Q8N5M1 289 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 RFWD2Q8NHY2 731 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 WNK4Q96J92 1243 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 DCDC2Q9UHG0 476 aa13.61□□□□□ -0.23
RNF43-208ENST00000584437 ZNF839A8K0R7 811 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 CLASP2O75122 1294 aaKnown RBP13.6□□□□□ -0.23
RNF43-208ENST00000584437 WBP4O75554 376 aaKnown RBP13.6□□□□□ -0.23
RNF43-208ENST00000584437 ZNF543Q08ER8 600 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 CEP78Q5JTW2 689 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 SYCP2LQ5T4T6 812 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 ANKS3Q6ZW76 656 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 CCDC60Q8IWA6 550 aaPredicted RBP13.6□□□□□ -0.23
RNF43-208ENST00000584437 AFG1LQ8WV93 481 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 MASTLQ96GX5 879 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 ACAD9Q9H845 621 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 TAGLN3Q9UI15 199 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 SOX13Q9UN79 622 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 PXDNLA1KZ92 1463 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 UGGT1Q9NYU2 1555 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 EVPLLA8MZ36 301 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 SNAP23O00161 211 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 NDUFS3O75489 264 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 RPS6KA4O75676 772 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 DGKIO75912 1065 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 ZCCHC18P0CG32 403 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 KCNMA1Q12791 1236 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 PLEKHA8Q96JA3 519 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 C17orf80Q9BSJ5 609 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms