RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ZNF197O14709 1029 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 PI15O43692 258 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 SOAT2O75908 522 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 MYL4P12829 197 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 PTPN5P54829 565 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 THEM5Q8N1Q8 247 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 DNAJC25Q9H1X3 360 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 ASAH2Q9NR71 780 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 INTS13Q9NVM9 706 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 SIX4Q9UIU6 781 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 ITGA11Q9UKX5 1188 aa23.12■■□□□ 1.29
PPP4R1-228ENST00000584074 SCN1AP35498 2009 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 UBE4BO95155 1302 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 TSC2P49815 1807 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 CLIC2O15247 247 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 MOSPD3O75425 235 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 MICAL2O94851 1124 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 KRT19P08727 400 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 TMEM191BP0C7N4 346 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 GJA1P17302 382 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 ALDH1A3P47895 512 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 CYP2J2P51589 502 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 EPHB3P54753 998 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 EPHA5P54756 1037 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 BFSP1Q12934 665 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 PLD1Q13393 1074 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 LRRTM3Q86VH5 581 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 LRRC52Q8N7C0 313 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 RDH13Q8NBN7 331 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 OR5B17Q8NGF7 314 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 ZSWIM3Q96MP5 696 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 PLA2G2FQ9BZM2 168 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 KIAA1586Q9HCI6 787 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 HPSEQ9Y251 543 aa23.11■■□□□ 1.29
PPP4R1-228ENST00000584074 STK25O00506 426 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 KLRC4O43908 158 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 AOC1P19801 751 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 RBP5P82980 135 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 SNRNP35Q16560 246 aaKnown RBP23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 BMT2Q1RMZ1 405 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 FAM78AQ5JUQ0 283 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 TANGO2Q6ICL3 276 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 HS2ST1Q7LGA3 356 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 PDCL2Q8N4E4 241 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 LEMD2Q8NC56 503 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 LRRC3Q9BY71 257 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 ARHGEF3Q9NR81 526 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 L1RE1Q9UN81 338 aa23.1■■□□□ 1.29
PPP4R1-228ENST00000584074 GALR2O43603 387 aaPredicted RBP23.09■■□□□ 1.29
PPP4R1-228ENST00000584074 ECI2O75521 394 aa23.09■■□□□ 1.29
PPP4R1-228ENST00000584074 HOXD11P31277 338 aaPredicted RBP23.09■■□□□ 1.29
PPP4R1-228ENST00000584074 NUBP1P53384 320 aa23.09■■□□□ 1.29
PPP4R1-228ENST00000584074 SURF1Q15526 300 aa23.09■■□□□ 1.29
PPP4R1-228ENST00000584074 TMC8Q8IU68 726 aa23.09■■□□□ 1.29
PPP4R1-228ENST00000584074 ANKRD36BP1Q96IX9 119 aa23.09■■□□□ 1.29
PPP4R1-228ENST00000584074 TBC1D17Q9HA65 648 aa23.09■■□□□ 1.29
PPP4R1-228ENST00000584074 ATP6V1DQ9Y5K8 247 aa23.09■■□□□ 1.29
PPP4R1-228ENST00000584074 HUS1O60921 280 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 FCARP24071 287 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 NDUFA8P51970 172 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 SNRPFP62306 86 aaKnown RBP23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 STK4Q13043 487 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 TEAD2Q15562 447 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 KNOP1Q1ED39 458 aaKnown RBP23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 DUOXA2Q1HG44 320 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 DNAJB7Q7Z6W7 309 aaPredicted RBP23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 XXYLT1Q8NBI6 393 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 SHKBP1Q8TBC3 707 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 PHOX2BQ99453 314 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 SEPT5Q99719 369 aaPredicted RBP23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 GDAP2Q9NXN4 497 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 HSFX1Q9UBD0 423 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 USP25Q9UHP3 1055 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 SNX9Q9Y5X1 595 aa23.08■■□□□ 1.29
PPP4R1-228ENST00000584074 H0Y858 1186 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 TNNC2P02585 160 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 DLATP10515 647 aaKnown RBP23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 RFX1P22670 979 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 SYKP43405 635 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 TUFMP49411 452 aaKnown RBP23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 MGAT5BQ3V5L5 792 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 KMT5BQ4FZB7 885 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 WDR49Q8IV35 697 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 KIAA0895Q8NCT3 520 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 PSMG2Q969U7 264 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 ELSPBP1Q96BH3 223 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 CCDC127Q96BQ5 260 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 ASB16Q96NS5 453 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 SCAND2PQ9GZW5 306 aaPredicted RBP23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 ZNF334Q9HCZ1 680 aaPredicted RBP23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 EXOC1Q9NV70 894 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 TMLHEQ9NVH6 421 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 ABI2Q9NYB9 513 aaPredicted RBP23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 ASB3Q9Y575 518 aa23.07■■□□□ 1.28
PPP4R1-228ENST00000584074 FAM237AA0A1B0GTK4 181 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 A0A1W2PRU2 124 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 ATF6P18850 670 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 CYP24A1Q07973 514 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 SNW1Q13573 536 aaKnown RBP23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 DCP1BQ8IZD4 617 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms