RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 H3BNC9 293 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 H7C4K7 107 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 I3L4J1 428 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 GABRDO14764 452 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 OAZ2O95190 189 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 TPM1P09493 284 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 WEE2P0C1S8 567 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 TKTP29401 623 aaKnown RBP12.46□□□□□ -0.41
CDRT1-207ENST00000583965 APBA1Q02410 837 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 YWHAHQ04917 246 aaPredicted RBP12.46□□□□□ -0.41
CDRT1-207ENST00000583965 BMS1Q14692 1282 aaKnown RBP12.46□□□□□ -0.41
CDRT1-207ENST00000583965 WSCD1Q658N2 575 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 OVOS1Q6IE37 1185 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 GJB7Q6PEY0 223 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 ANKS3Q6ZW76 656 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 CACNA2D4Q7Z3S7 1137 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 UNC93AQ86WB7 457 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 VPS52Q8N1B4 723 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 THEM5Q8N1Q8 247 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 UBR7Q8N806 425 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 ZNF397Q8NF99 534 aaPredicted RBP12.46□□□□□ -0.41
CDRT1-207ENST00000583965 SHC3Q92529 594 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 ELMO3Q96BJ8 720 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 KREMEN1Q96MU8 473 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 ARID3AQ99856 593 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 VN1R3Q9BXE9 311 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 STK33Q9BYT3 514 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 TTYH3Q9C0H2 523 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 SNX25Q9H3E2 840 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 CHST7Q9NS84 486 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 CISHQ9NSE2 258 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 BARX2Q9UMQ3 279 aaPredicted RBP12.46□□□□□ -0.41
CDRT1-207ENST00000583965 CNTN6Q9UQ52 1028 aa12.46□□□□□ -0.41
CDRT1-207ENST00000583965 PLXNA3P51805 1871 aa12.46□□□□□ -0.42
CDRT1-207ENST00000583965 EPHB6O15197 1021 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 CILPO75339 1184 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 URODP06132 367 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 CTSAP10619 480 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 PCSK1P29120 753 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 GNL1P36915 607 aaPredicted RBP12.45□□□□□ -0.42
CDRT1-207ENST00000583965 RAP1GAPP47736 663 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 GLUD2P49448 558 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 CDH8P55286 799 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 JAM2P57087 298 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 DSG1Q02413 1049 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 CREMQ03060 361 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 RAPGEF1Q13905 1077 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 MRPL58Q14197 206 aaKnown RBP12.45□□□□□ -0.42
CDRT1-207ENST00000583965 DRAP1Q14919 205 aaPredicted RBP12.45□□□□□ -0.42
CDRT1-207ENST00000583965 PTPN21Q16825 1174 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 ARHGAP44Q17R89 818 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 VARS2Q5ST30 1063 aaKnown RBP12.45□□□□□ -0.42
CDRT1-207ENST00000583965 PDE12Q6L8Q7 609 aaKnown RBP12.45□□□□□ -0.42
CDRT1-207ENST00000583965 KIAA1841Q6NSI8 718 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 TMC6Q7Z403 805 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 OR6B3Q8NGW1 331 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 SPPL3Q8TCT6 385 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 KBTBD7Q8WVZ9 684 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 PIK3R5Q8WYR1 880 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 KAT5Q92993 513 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 SPAG5Q96R06 1193 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 LMAN2LQ9H0V9 348 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 ZBP1Q9H171 429 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 SDCBP2Q9H190 292 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 NUCKS1Q9H1E3 243 aaKnown RBP12.45□□□□□ -0.42
CDRT1-207ENST00000583965 NLRC4Q9NPP4 1024 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 CAPN11Q9UMQ6 739 aa12.45□□□□□ -0.42
CDRT1-207ENST00000583965 ZNF638Q14966 1978 aaKnown RBP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 OR6C75A6NL08 312 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 A8MXQ7 604 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 F8VZ95 297 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 GYPCP04921 128 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 CD58P19256 250 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 ACO1P21399 889 aaKnown RBP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 STAT1P42224 750 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 NDST1P52848 882 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 ZBED6P86452 979 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 TBX2Q13207 712 aaPredicted RBP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 GPM6BQ13491 265 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 KIAA0319Q5VV43 1072 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 ZNF280DQ6N043 979 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 TAS1R1Q7RTX1 841 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 DRC7Q8IY82 874 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 BAP1Q92560 729 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 TNIP3Q96KP6 325 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 ACBD6Q9BR61 282 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 MRPL45Q9BRJ2 306 aaKnown RBP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 NT5C1AQ9BXI3 368 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 NGRNQ9NPE2 291 aaKnown RBP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 TLR9Q9NR96 1032 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 MRPL17Q9NRX2 175 aaKnown RBP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 DDX43Q9NXZ2 648 aaKnown RBP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 IMPACTQ9P2X3 320 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 AJAP1Q9UKB5 411 aaPredicted RBP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 CDH9Q9ULB4 789 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 MTUS1Q9ULD2 1270 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 STXBP5LQ9Y2K9 1186 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms