RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 DDX3YO15523 660 aaKnown RBP10.87□□□□□ -0.67
IFT20-213ENST00000583796 TFRCP02786 760 aaKnown RBP10.87□□□□□ -0.67
IFT20-213ENST00000583796 VDRP11473 427 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 CD58P19256 250 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 TNFRSF8P28908 595 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 CXCR5P32302 372 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 CTNNA1P35221 906 aaKnown RBP10.87□□□□□ -0.67
IFT20-213ENST00000583796 RAB27AP51159 221 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 PTK7Q13308 1070 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 UBXN11Q5T124 520 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 GDF6Q6KF10 455 aaPredicted RBP10.87□□□□□ -0.67
IFT20-213ENST00000583796 FAM228AQ86W67 206 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 UNC93AQ86WB7 457 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.87□□□□□ -0.67
IFT20-213ENST00000583796 RAET1EQ8TD07 263 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.87□□□□□ -0.67
IFT20-213ENST00000583796 CD101Q93033 1021 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 EIF2AQ9BY44 585 aaKnown RBP10.87□□□□□ -0.67
IFT20-213ENST00000583796 SLC38A7Q9NVC3 462 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 SNTG2Q9NY99 539 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 WDR35Q9P2L0 1181 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 NXF1Q9UBU9 619 aaKnown RBP10.87□□□□□ -0.67
IFT20-213ENST00000583796 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
IFT20-213ENST00000583796 CDY2AQ9Y6F7 541 aa10.87□□□□□ -0.67
IFT20-213ENST00000583796 TRIP12Q14669 1992 aaPredicted RBP10.86□□□□□ -0.67
IFT20-213ENST00000583796 GOLGA6L10A0A0M3HER8 536 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 RRP9O43818 475 aaKnown RBP10.86□□□□□ -0.67
IFT20-213ENST00000583796 CEP104O60308 925 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 RPS6KA5O75582 802 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 WEE2P0C1S8 567 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 FGFR4P22455 802 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 PAX3P23760 479 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 RRM1P23921 792 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 RAD23BP54727 409 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
IFT20-213ENST00000583796 MGAT3Q09327 533 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 PTP4A2Q12974 167 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 KCNA10Q16322 511 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 C8orf74Q6P047 294 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 DNAAF5Q86Y56 855 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 EIF1ADQ8N9N8 165 aaKnown RBP10.86□□□□□ -0.67
IFT20-213ENST00000583796 TMEM176AQ96HP8 235 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 PSMB7Q99436 277 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 NT5C1AQ9BXI3 368 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 NXF3Q9H4D5 531 aaKnown RBP10.86□□□□□ -0.67
IFT20-213ENST00000583796 SLITRK6Q9H5Y7 841 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 GDAP2Q9NXN4 497 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 ANAPC7Q9UJX3 599 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 PACSIN2Q9UNF0 486 aaPredicted RBP10.86□□□□□ -0.67
IFT20-213ENST00000583796 NOC2LQ9Y3T9 749 aaKnown RBP10.86□□□□□ -0.67
IFT20-213ENST00000583796 IPPQ9Y573 584 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 PCDHA3Q9Y5H8 950 aa10.86□□□□□ -0.67
IFT20-213ENST00000583796 SMIM28A0A1B0GU29 152 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 PIRO00625 290 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 PSTPIP1O43586 416 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 SPOPO43791 374 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 RHOXF2BP0C7M4 288 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 SKIP12755 728 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 COMTP21964 271 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 CCND3P30281 292 aaPredicted RBP10.85□□□□□ -0.67
IFT20-213ENST00000583796 LRPAP1P30533 357 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 SNX16P57768 344 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 RBM10P98175 930 aaKnown RBP10.85□□□□□ -0.67
IFT20-213ENST00000583796 C2orf54Q08AI8 447 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 MESDQ14696 234 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 CNGA2Q16280 664 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 SGO2Q562F6 1265 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 FAM47CQ5HY64 1035 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 FAM26DQ5JW98 314 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 FBXO47Q5MNV8 452 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 C9orf57Q5W0N0 161 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 TWF2Q6IBS0 349 aaKnown RBP10.85□□□□□ -0.67
IFT20-213ENST00000583796 CC2D1AQ6P1N0 951 aaPredicted RBP10.85□□□□□ -0.67
IFT20-213ENST00000583796 SCARA5Q6ZMJ2 495 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 DPH6Q7L8W6 267 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 SLC4A11Q8NBS3 891 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 C3orf20Q8ND61 904 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 FNIP1Q8TF40 1166 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 CPA5Q8WXQ8 436 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 ELMO3Q96BJ8 720 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 RNPC3Q96LT9 517 aaKnown RBP10.85□□□□□ -0.67
IFT20-213ENST00000583796 RUNDC3BQ96NL0 473 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 RHOXF2Q9BQY4 288 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 C11orf70Q9BRQ4 267 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 SMYD3Q9H7B4 428 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 RBM12Q9NTZ6 932 aaKnown RBP10.85□□□□□ -0.67
IFT20-213ENST00000583796 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.85□□□□□ -0.67
IFT20-213ENST00000583796 STIM2Q9P246 746 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 IP6K2Q9UHH9 426 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 POLIQ9UNA4 740 aa10.85□□□□□ -0.67
IFT20-213ENST00000583796 ZNF623O75123 536 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 TRPA1O75762 1119 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 PROSCO94903 275 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 ZRANB2O95218 330 aaKnown RBP eCLIP10.84□□□□□ -0.67
IFT20-213ENST00000583796 SETSIPP0DME0 302 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 CD19P15391 556 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 ELNP15502 786 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 BRD2P25440 801 aaKnown RBP10.84□□□□□ -0.67
IFT20-213ENST00000583796 PEX5P50542 639 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 RWDD2BP57060 319 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms