RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 MMP10P09238 476 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 CACNA2D1P54289 1103 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 CLEC16AQ2KHT3 1053 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 KHDC1Q4VXA5 237 aaKnown RBP11.13□□□□□ -0.63
RNF43-207ENST00000583753 MROH9Q5TGP6 573 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 RASSF3Q86WH2 238 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 ACTL9Q8TC94 416 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 VTI1AQ96AJ9 217 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 CLPTM1LQ96KA5 538 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 TTC25Q96NG3 672 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 MXRA8Q9BRK3 442 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 MYH1P12882 1939 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 MYH4Q9Y623 1939 aa11.13□□□□□ -0.63
RNF43-207ENST00000583753 IQANK1A0A1B0GTG1 560 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 FAM237BA0A1B0GVD1 139 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 TRIM49D1C9J1S8 452 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 STK10O94804 968 aaKnown RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 IL1R1P14778 569 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 EIF3EP60228 445 aaKnown RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 PSMC1P62191 440 aaKnown RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 IGBP1P78318 339 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 MRPS35P82673 323 aaKnown RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 SPIRE1Q08AE8 756 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 LGSNQ5TDP6 509 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 DSTYKQ6XUX3 929 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 PRPF39Q86UA1 669 aaKnown RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 GLIS2Q9BZE0 524 aaPredicted RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 RAB6BQ9NRW1 208 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 SCINQ9Y6U3 715 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 INO80B-WBP1J3KQ70 363 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 USP1O94782 785 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 PROSCO94903 275 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 CFHP08603 1231 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 PTPN4P29074 926 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 OTUD4Q01804 1114 aaKnown RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 NR1H3Q13133 447 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 EML3Q32P44 896 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 OR6B2Q6IFH4 312 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 TTC7BQ86TV6 843 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 LENG9Q96B70 501 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 SENP7Q9BQF6 1050 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 HERPUD2Q9BSE4 406 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 MECRQ9BV79 373 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 INO80BQ9C086 356 aaPredicted RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 DCLRE1BQ9H816 532 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 ARL8BQ9NVJ2 186 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 GOLGB1Q14789 3259 aaKnown RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 POLRMTO00411 1230 aaKnown RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 ZWINTO95229 277 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 RBP3P10745 1247 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 CHRNA5P30532 468 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 ALDH1B1P30837 517 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
RNF43-207ENST00000583753 GAD2Q05329 585 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 GABPAQ06546 454 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 SGSM1Q2NKQ1 1148 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 IZUMO2Q6UXV1 221 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 CRLF3Q8IUI8 442 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 FAM71AQ8IYT1 594 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 FEZF2Q8TBJ5 459 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 MTBPQ96DY7 904 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 FAXDC2Q96IV6 333 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 FAM81BQ96LP2 452 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 TMEM39BQ9GZU3 492 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 LRRC19Q9H756 370 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 INPP5FQ9Y2H2 1132 aa11.12□□□□□ -0.63
RNF43-207ENST00000583753 H0YIN7 160 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 PFDN1O60925 122 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 PSMD10O75832 226 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 TCF4P15884 667 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 CDH6P55285 790 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 PSMC5P62195 406 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 PTK6Q13882 451 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 CHI3L2Q15782 390 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 GPAT2Q6NUI2 795 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 SPATA24Q86W54 205 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 PLEKHO2Q8TD55 490 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 CNKSR1Q969H4 720 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 PIDD1Q9HB75 910 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 PARVAQ9NVD7 372 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 IP6K2Q9UHH9 426 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 ANGPTL2Q9UKU9 493 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 FSCN2O14926 492 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 ATP6V1B1P15313 513 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 SLC1A1P43005 524 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 LRRC23Q53EV4 343 aaPredicted RBP11.11□□□□□ -0.63
RNF43-207ENST00000583753 TMEM35BQ8NCS4 154 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 GSDMBQ8TAX9 411 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 RNF217Q8TC41 542 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 EBF2Q9HAK2 575 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 ARHGEF3Q9NR81 526 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 NMRK1Q9NWW6 199 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 FRMPD4Q14CM0 1322 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 MARF1Q9Y4F3 1742 aaKnown RBP11.11□□□□□ -0.63
RNF43-207ENST00000583753 LRP6O75581 1613 aa11.11□□□□□ -0.63
RNF43-207ENST00000583753 FCHO1O14526 889 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms