RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 CDC25CP30307 473 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 LRPAP1P30533 357 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 GUCY1B3Q02153 619 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 CREB5Q02930 508 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 FOXC1Q12948 553 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 ORC2Q13416 577 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-215ENST00000583328 RUNX3Q13761 415 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.27
TOP3A-215ENST00000583328 VEPH1Q14D04 833 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 ELF2Q15723 593 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 TAF12Q16514 161 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 ME3Q16798 604 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 DAB2IPQ5VWQ8 1189 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 OVOS1Q6IE37 1185 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 FSTL4Q6MZW2 842 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 DAW1Q8N136 415 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 TTC9BQ8N6N2 239 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 GTF3C6Q969F1 213 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 DRC1Q96MC2 740 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 HHIPQ96QV1 700 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 KIF2CQ99661 725 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 DUSP15Q9H1R2 295 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-215ENST00000583328 PLEKHA5Q9HAU0 1116 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 POLR3BQ9NW08 1133 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-215ENST00000583328 LRWD1Q9UFC0 647 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 UBQLN1Q9UMX0 589 aaKnown RBP13.37□□□□□ -0.27
TOP3A-215ENST00000583328 DNM3Q9UQ16 869 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 TRIP11Q15643 1979 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 SFI1A8K8P3 1242 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 E9PMD0 336 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 TRDMT1O14717 391 aaKnown RBP13.36□□□□□ -0.27
TOP3A-215ENST00000583328 CLDN3O15551 220 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 RNF40O75150 1001 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 EGFP01133 1207 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 CXCL8P10145 99 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 TYMPP19971 482 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 CYP3A5P20815 502 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 TUFMP49411 452 aaKnown RBP13.36□□□□□ -0.27
TOP3A-215ENST00000583328 AARSP49588 968 aaKnown RBP eCLIP13.36□□□□□ -0.27
TOP3A-215ENST00000583328 AMPD2Q01433 879 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 ZNF252P-AS1Q0IIN9 211 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 MGAT5BQ3V5L5 792 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 KDF1Q8NAX2 398 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-215ENST00000583328 SNX29Q8TEQ0 813 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 SEPT5Q99719 369 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-215ENST00000583328 LPIN3Q9BQK8 851 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 FAM83CQ9BQN1 747 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 SLC46A2Q9BY10 475 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 EBF3Q9H4W6 596 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 C17orf75Q9HAS0 396 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-215ENST00000583328 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
TOP3A-215ENST00000583328 DCLK1O15075 740 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 XPOTO43592 962 aaKnown RBP13.35□□□□□ -0.27
TOP3A-215ENST00000583328 LARGE1O95461 756 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 CLTAP09496 248 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 HOXB3P14651 431 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-215ENST00000583328 SPINK2P20155 84 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
TOP3A-215ENST00000583328 GUCY2FP51841 1108 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 NEK4P51957 841 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 SMTNP53814 917 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 MCL1Q07820 350 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 RABEP1Q15276 862 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 TTC38Q5R3I4 469 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 SH3PXD2AQ5TCZ1 1133 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 TRIM68Q6AZZ1 485 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 CMTM8Q8IZV2 173 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 GIPC2Q8TF65 315 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 EXOC4Q96A65 974 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 NTPCRQ9BSD7 190 aaKnown RBP13.35□□□□□ -0.27
TOP3A-215ENST00000583328 RUSC1Q9BVN2 902 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 HPS4Q9NQG7 708 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 HSFX1Q9UBD0 423 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 KCNG1Q9UIX4 513 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 BAHCC1Q9P281 2608 aa13.35□□□□□ -0.27
TOP3A-215ENST00000583328 TTC26A0AVF1 554 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 BCLAF3A2AJT9 711 aaKnown RBP13.34□□□□□ -0.27
TOP3A-215ENST00000583328 LACTBL1A8MY62 500 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 ODC1P11926 461 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 DRD1P21728 446 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 GBP1P32455 592 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 AVPR1AP37288 418 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 GALK1P51570 392 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 CDR1P51861 262 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 PPP2R3AQ06190 1150 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 BFSP1Q12934 665 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 MAPK7Q13164 816 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 PDIA5Q14554 519 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 KARSQ15046 597 aaKnown RBP13.34□□□□□ -0.27
TOP3A-215ENST00000583328 ZBTB6Q15916 424 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 FBXO43Q4G163 708 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 SLC39A12Q504Y0 691 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 CC2D1AQ6P1N0 951 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-215ENST00000583328 ZPBP2Q6X784 338 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 C1orf186Q6ZWK4 172 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 SPIRE2Q8WWL2 714 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 SENP8Q96LD8 212 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 ADAM33Q9BZ11 813 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms