RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 TMEM35BQ8NCS4 154 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 ARRDC4Q8NCT1 418 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 HDAC7Q8WUI4 952 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 TMEM176AQ96HP8 235 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 SENP6Q9GZR1 1112 aaPredicted RBP11.91□□□□□ -0.5
GGA3-213ENST00000582486 TMEM59LQ9UK28 342 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 TARSL2A2RTX5 802 aaKnown RBP11.9□□□□□ -0.5
GGA3-213ENST00000582486 MIF4GDA9UHW6 222 aaKnown RBP11.9□□□□□ -0.5
GGA3-213ENST00000582486 PGRMC1O00264 195 aaKnown RBP11.9□□□□□ -0.5
GGA3-213ENST00000582486 SPOPO43791 374 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 LSM8O95777 96 aaKnown RBP11.9□□□□□ -0.5
GGA3-213ENST00000582486 THPOP40225 353 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 SLC7A5Q01650 507 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 PTPN11Q06124 597 aaPredicted RBP11.9□□□□□ -0.5
GGA3-213ENST00000582486 ZNF211Q13398 564 aaPredicted RBP11.9□□□□□ -0.5
GGA3-213ENST00000582486 MAMLD1Q13495 774 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 SMYD5Q6GMV2 418 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 PPP1R2P3Q6NXS1 205 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 WDR93Q6P2C0 686 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 DENND1BQ6P3S1 775 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 RNF180Q86T96 592 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 CD101Q93033 1021 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 AP1M1Q9BXS5 423 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 OSBPL7Q9BZF2 842 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 CARD9Q9H257 536 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 BARX2Q9UMQ3 279 aaPredicted RBP11.9□□□□□ -0.5
GGA3-213ENST00000582486 UBQLN1Q9UMX0 589 aaKnown RBP11.9□□□□□ -0.5
GGA3-213ENST00000582486 SNX9Q9Y5X1 595 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 RALGAPA2Q2PPJ7 1873 aa11.9□□□□□ -0.5
GGA3-213ENST00000582486 MYO1FO00160 1098 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 TLR3O15455 904 aaKnown RBP11.89□□□□□ -0.51
GGA3-213ENST00000582486 GJB6O95452 261 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 CDH5P33151 784 aaPredicted RBP11.89□□□□□ -0.51
GGA3-213ENST00000582486 PEX5P50542 639 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 NDST1P52848 882 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 MGAT3Q09327 533 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 XKR4Q5GH76 650 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 C9orf57Q5W0N0 161 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 PLEKHA7Q6IQ23 1121 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 CCDC70Q6NSX1 233 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 RPAINQ86UA6 219 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 UBL4BQ8N7F7 174 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 HEXIM2Q96MH2 286 aaKnown RBP11.89□□□□□ -0.51
GGA3-213ENST00000582486 ZNF518BQ9C0D4 1074 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 ARFGAP3Q9NP61 516 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 DMGDHQ9UI17 866 aaKnown RBP11.89□□□□□ -0.51
GGA3-213ENST00000582486 CEP83Q9Y592 693 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 MED7O43513 233 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 ZRANB2O95218 330 aaKnown RBP eCLIP11.89□□□□□ -0.51
GGA3-213ENST00000582486 FGGP02679 453 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 TUBBP07437 444 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 KCNE1P15382 129 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 INCA1Q0VD86 236 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 ITGA7Q13683 1181 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 AADACL2Q6P093 401 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 LRRC52Q8N7C0 313 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 RNPC3Q96LT9 517 aaKnown RBP11.89□□□□□ -0.51
GGA3-213ENST00000582486 KRT12Q99456 494 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 WNT8AQ9H1J5 351 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 AGO3Q9H9G7 860 aaKnown RBP11.89□□□□□ -0.51
GGA3-213ENST00000582486 GOLGA2P5Q9HBQ8 144 aa11.89□□□□□ -0.51
GGA3-213ENST00000582486 MRPL47Q9HD33 250 aaKnown RBP11.89□□□□□ -0.51
GGA3-213ENST00000582486 TRMT13Q9NUP7 481 aaKnown RBP11.89□□□□□ -0.51
GGA3-213ENST00000582486 THSD7BQ9C0I4 1608 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 MEIS3P2A8K0S8 358 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 ACLYP53396 1101 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 SOX4Q06945 474 aaPredicted RBP11.88□□□□□ -0.51
GGA3-213ENST00000582486 C8orf74Q6P047 294 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 DPH6Q7L8W6 267 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 ERICH1Q86X53 443 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 KLHL7Q8IXQ5 586 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 MRPL45Q9BRJ2 306 aaKnown RBP11.88□□□□□ -0.51
GGA3-213ENST00000582486 LHX5Q9H2C1 402 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 PARVAQ9NVD7 372 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 CYTH4Q9UIA0 394 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 TTC7AQ9ULT0 858 aaPredicted RBP11.88□□□□□ -0.51
GGA3-213ENST00000582486 PCDHA3Q9Y5H8 950 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 SCINQ9Y6U3 715 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 KRIT1O00522 736 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 PIRO00625 290 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 GNRH1P01148 92 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 CD4P01730 458 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 INHAP05111 366 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 CALB1P05937 261 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 ITGA4P13612 1032 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 CTNNA1P35221 906 aaKnown RBP11.88□□□□□ -0.51
GGA3-213ENST00000582486 RPL7AP62424 266 aaKnown RBP11.88□□□□□ -0.51
GGA3-213ENST00000582486 LONRF2Q1L5Z9 754 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 BEND6Q5SZJ8 279 aaPredicted RBP11.88□□□□□ -0.51
GGA3-213ENST00000582486 CYP4A22Q5TCH4 519 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 DAB2IPQ5VWQ8 1189 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 ZNF784Q8NCA9 323 aaPredicted RBP11.88□□□□□ -0.51
GGA3-213ENST00000582486 ZNF296Q8WUU4 475 aaPredicted RBP11.88□□□□□ -0.51
GGA3-213ENST00000582486 HNRNPLLQ8WVV9 542 aaKnown RBP11.88□□□□□ -0.51
GGA3-213ENST00000582486 ZFP42Q96MM3 310 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 NT5C1AQ9BXI3 368 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 PLEKHA4Q9H4M7 779 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 FAM105AQ9NUU6 356 aa11.88□□□□□ -0.51
GGA3-213ENST00000582486 CCDC66A2RUB6 948 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms