RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 CTXN3Q4LDR2 81 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 SPDYCQ5MJ68 293 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 FSTL4Q6MZW2 842 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 PKN3Q6P5Z2 889 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 NOSTRINQ8IVI9 506 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 TPH2Q8IWU9 490 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 ACDQ96AP0 544 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 SUSD3Q96L08 255 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 CCDC43Q96MW1 224 aaKnown RBP6.83□□□□□ -1.32
TVP23B-210ENST00000582288 LRRC3BQ96PB8 259 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 FAM83CQ9BQN1 747 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 CCDC113Q9H0I3 377 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 POLR3FQ9H1D9 316 aaPredicted RBP6.83□□□□□ -1.32
TVP23B-210ENST00000582288 CXCL16Q9H2A7 254 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 CACNA2D2Q9NY47 1150 aa6.83□□□□□ -1.32
TVP23B-210ENST00000582288 NAP1L2Q9ULW6 460 aaPredicted RBP6.83□□□□□ -1.32
TVP23B-210ENST00000582288 NUP210Q8TEM1 1887 aaPredicted RBP6.83□□□□□ -1.32
TVP23B-210ENST00000582288 ADAMTS20P59510 1910 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 IGF2RP11717 2491 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 CCDC194A0A1B0GVG4 234 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 PODXLO00592 558 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 MEFVO15553 781 aaPredicted RBP6.82□□□□□ -1.32
TVP23B-210ENST00000582288 MARCH6O60337 910 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 HOXD12P35452 270 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 GRM5P41594 1212 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 NAMPTP43490 491 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 ALDH1A3P47895 512 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 SMCPP49901 116 aaPredicted RBP6.82□□□□□ -1.32
TVP23B-210ENST00000582288 YARSP54577 528 aaKnown RBP6.82□□□□□ -1.32
TVP23B-210ENST00000582288 ARPP19P56211 112 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 IRX4P78413 519 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 CYP4A11Q02928 519 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 GPR17Q13304 367 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 RUNX3Q13761 415 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 PPP2R5AQ15172 486 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 TMEM132AQ24JP5 1023 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 INF2Q27J81 1249 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 ADCK5Q3MIX3 580 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 USP39Q53GS9 565 aaKnown RBP6.82□□□□□ -1.32
TVP23B-210ENST00000582288 ARHGAP15Q53QZ3 475 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 NCAPH2Q6IBW4 605 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 RNF19BQ6ZMZ0 732 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 Q6ZUG5 572 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 CYP2U1Q7Z449 544 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 RAB44Q7Z6P3 723 aaPredicted RBP6.82□□□□□ -1.32
TVP23B-210ENST00000582288 PIP4P1Q86T03 277 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 ITIH5Q86UX2 942 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 GLIS3Q8NEA6 775 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 DEFB124Q8NES8 71 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 DDX12PQ92771 950 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 KCNB2Q92953 911 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 BRF1Q92994 677 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 TATDN2Q93075 761 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 PSMG2Q969U7 264 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 ZFYVE19Q96K21 471 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 EIF2AK1Q9BQI3 630 aaKnown RBP6.82□□□□□ -1.32
TVP23B-210ENST00000582288 NUSAP1Q9BXS6 441 aaKnown RBP6.82□□□□□ -1.32
TVP23B-210ENST00000582288 TASP1Q9H6P5 420 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 DKK4Q9UBT3 224 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 KLK13Q9UKR3 277 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 PCDHA12Q9UN75 941 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 GDAQ9Y2T3 454 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 YIPF1Q9Y548 306 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 NUB1Q9Y5A7 615 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 EML5Q05BV3 1969 aa6.82□□□□□ -1.32
TVP23B-210ENST00000582288 PHLPP2Q6ZVD8 1323 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 OR6C75A6NL08 312 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 M0QZQ0 153 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 TNFRSF10BO14763 440 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 CCNT1O60563 726 aaKnown RBP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 CPB1P15086 417 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 PAX3P23760 479 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 DDX6P26196 483 aaKnown RBP eCLIP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 MARCKSP29966 332 aaPredicted RBP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 PDIA3P30101 505 aaKnown RBP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 CDC25CP30307 473 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 GBP1P32455 592 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 YWHAHQ04917 246 aaPredicted RBP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 SOX4Q06945 474 aaPredicted RBP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 TNK2Q07912 1038 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 SSRP1Q08945 709 aaKnown RBP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 MYBPC2Q14324 1141 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 DMC1Q14565 340 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 GLRA4Q5JXX5 417 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 GPR158Q5T848 1215 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 PEAR1Q5VY43 1037 aaPredicted RBP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 CENPPQ6IPU0 288 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 SLC23A3Q6PIS1 610 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 GAREM2Q75VX8 874 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 DNAJB7Q7Z6W7 309 aaPredicted RBP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 RASSF3Q86WH2 238 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 DEPTORQ8TB45 409 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 CHFRQ96EP1 664 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 CNOT6LQ96LI5 555 aaKnown RBP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 NACC1Q96RE7 527 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 P2RY13Q9BPV8 354 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 CCDC94Q9BW85 323 aaPredicted RBP6.81□□□□□ -1.32
TVP23B-210ENST00000582288 DNAJC25Q9H1X3 360 aa6.81□□□□□ -1.32
TVP23B-210ENST00000582288 ATXN3LQ9H3M9 355 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms