RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ELMO3Q96BJ8 720 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 HPDLQ96IR7 371 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 FAM84AQ96KN4 292 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 SYT11Q9BT88 431 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 NUP85Q9BW27 656 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 TLR10Q9BXR5 811 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 CELF4Q9BZC1 486 aaKnown RBP9.89□□□□□ -0.83
SS18-220ENST00000582092 CYP3A43Q9HB55 503 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 CISHQ9NSE2 258 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 TAS2R14Q9NYV8 317 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 CNOT8Q9UFF9 292 aaKnown RBP9.89□□□□□ -0.83
SS18-220ENST00000582092 SALL4Q9UJQ4 1053 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 GTF3C4Q9UKN8 822 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 C2CD2Q9Y426 696 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 FAM170AA1A519 330 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 CES2O00748 559 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 ZNF185O15231 689 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 FAM189A1O60320 539 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 BUB1BO60566 1050 aaPredicted RBP9.88□□□□□ -0.83
SS18-220ENST00000582092 RPS6KA5O75582 802 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 CALB1P05937 261 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 NFICP08651 508 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 WEE2P0C1S8 567 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 CKBP12277 381 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 DNAJB2P25686 324 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 POLR2BP30876 1174 aaKnown RBP9.88□□□□□ -0.83
SS18-220ENST00000582092 THPOP40225 353 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 CETN2P41208 172 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 MRPS6P82932 125 aaKnown RBP9.88□□□□□ -0.83
SS18-220ENST00000582092 ZNF200P98182 395 aaPredicted RBP9.88□□□□□ -0.83
SS18-220ENST00000582092 BRD3Q15059 726 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 SLC10A6Q3KNW5 377 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 ZNF394Q53GI3 561 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 ODF2Q5BJF6 829 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 SEL1L2Q5TEA6 688 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 NAA35Q5VZE5 725 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 C16orf59Q7L2K0 433 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 SERINC5Q86VE9 423 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 DNAAF5Q86Y56 855 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 EFCAB13Q8IY85 973 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 LRRN4CLQ8ND94 238 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 ZNF564Q8TBZ8 553 aaPredicted RBP9.88□□□□□ -0.83
SS18-220ENST00000582092 PHOSPHO2Q8TCD6 241 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 PPP1R13LQ8WUF5 828 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 CPA5Q8WXQ8 436 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 TIFAQ96CG3 184 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 VCPIP1Q96JH7 1222 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 SLC9A7Q96T83 725 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 PCDHB18PQ96TA0 734 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 ARID3AQ99856 593 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 PARD6BQ9BYG5 372 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 SYNCQ9H7C4 482 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 APOBEC3GQ9HC16 384 aaKnown RBP9.88□□□□□ -0.83
SS18-220ENST00000582092 ARFGAP3Q9NP61 516 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 MTMR10Q9NXD2 777 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 SNTG2Q9NY99 539 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 ADAM22Q9P0K1 906 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 LCMT1Q9UIC8 334 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 NENFQ9UMX5 172 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.88□□□□□ -0.83
SS18-220ENST00000582092 TRPV2Q9Y5S1 764 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 SCINQ9Y6U3 715 aa9.88□□□□□ -0.83
SS18-220ENST00000582092 MYH10P35580 1976 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 GOLGA6L10A0A0M3HER8 536 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 MYO1FO00160 1098 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 GPR182O15218 404 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 LSM8O95777 96 aaKnown RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 CYP1A2P05177 515 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 PAEPP09466 180 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 ATP2A2P16615 1042 aaKnown RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 ACO1P21399 889 aaKnown RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 SSR1P43307 286 aaKnown RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 HADHBP55084 474 aaKnown RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 SNX16P57768 344 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 RNASE9P60153 205 aaKnown RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 ITIH3Q06033 890 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 C2orf54Q08AI8 447 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 NFX1Q12986 1120 aaKnown RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 IKBKEQ14164 716 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 GLE1Q53GS7 698 aaKnown RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 ZFYVE27Q5T4F4 411 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 RASIP1Q5U651 963 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 C11orf63Q6NUN7 778 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 CNKSR3Q6P9H4 555 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 ERICH1Q86X53 443 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 CREG2Q8IUH2 290 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 PASD1Q8IV76 773 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 TMEM192Q8IY95 271 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 MCOLN2Q8IZK6 566 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 COG1Q8WTW3 980 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 ZNF606Q8WXB4 792 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 ARHGEF26Q96DR7 871 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 CYFIP2Q96F07 1278 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 HEXIM2Q96MH2 286 aaKnown RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 RPS6KC1Q96S38 1066 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 ZNF518BQ9C0D4 1074 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 MIS12Q9H081 205 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 ACBD3Q9H3P7 528 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 FAM124BQ9H5Z6 455 aaPredicted RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 SLC28A3Q9HAS3 691 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms