RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 TRPV5Q9NQA5 729 aa24.11■■□□□ 1.45
CASC3-207ENST00000581849 ITGA11Q9UKX5 1188 aa24.11■■□□□ 1.45
CASC3-207ENST00000581849 GFRA3O60609 400 aa24.1■■□□□ 1.45
CASC3-207ENST00000581849 TFAMQ00059 246 aaKnown RBP24.1■■□□□ 1.45
CASC3-207ENST00000581849 SURF1Q15526 300 aa24.1■■□□□ 1.45
CASC3-207ENST00000581849 SHKBP1Q8TBC3 707 aa24.1■■□□□ 1.45
CASC3-207ENST00000581849 SPATA18Q8TC71 538 aa24.1■■□□□ 1.45
CASC3-207ENST00000581849 SPPL2BQ8TCT7 592 aa24.1■■□□□ 1.45
CASC3-207ENST00000581849 TMEM209Q96SK2 561 aa24.1■■□□□ 1.45
CASC3-207ENST00000581849 NELL2Q99435 816 aa24.1■■□□□ 1.45
CASC3-207ENST00000581849 C7orf25Q9BPX7 421 aa24.1■■□□□ 1.45
CASC3-207ENST00000581849 CFAP45Q9UL16 551 aa24.1■■□□□ 1.45
CASC3-207ENST00000581849 UBE4BO95155 1302 aa24.1■■□□□ 1.45
CASC3-207ENST00000581849 WNT7BP56706 349 aa24.09■■□□□ 1.45
CASC3-207ENST00000581849 WSCD1Q658N2 575 aa24.09■■□□□ 1.45
CASC3-207ENST00000581849 C1orf127Q8N9H9 656 aa24.09■■□□□ 1.45
CASC3-207ENST00000581849 TRMT61BQ9BVS5 477 aaKnown RBP24.09■■□□□ 1.45
CASC3-207ENST00000581849 FOXQ1Q9C009 403 aa24.09■■□□□ 1.45
CASC3-207ENST00000581849 KIAA1586Q9HCI6 787 aa24.09■■□□□ 1.45
CASC3-207ENST00000581849 SLC27A5Q9Y2P5 690 aa24.09■■□□□ 1.45
CASC3-207ENST00000581849 ITGB3P05106 788 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 PSMC3P17980 439 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 POLR2BP30876 1174 aaKnown RBP24.08■■□□□ 1.45
CASC3-207ENST00000581849 SNRPFP62306 86 aaKnown RBP24.08■■□□□ 1.45
CASC3-207ENST00000581849 ASIC1P78348 528 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 VEPH1Q14D04 833 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 TEAD2Q15562 447 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 SLC39A12Q504Y0 691 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 EPM2AIP1Q7L775 607 aaPredicted RBP24.08■■□□□ 1.45
CASC3-207ENST00000581849 DNAJB7Q7Z6W7 309 aaPredicted RBP24.08■■□□□ 1.45
CASC3-207ENST00000581849 DCP1BQ8IZD4 617 aaKnown RBP24.08■■□□□ 1.45
CASC3-207ENST00000581849 TMEM86AQ8N2M4 240 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 ZSWIM2Q8NEG5 633 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 CXorf38Q8TB03 319 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 ZSCAN18Q8TBC5 510 aaPredicted RBP24.08■■□□□ 1.45
CASC3-207ENST00000581849 ZNF507Q8TCN5 953 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 IRF7Q92985 503 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 ZSWIM3Q96MP5 696 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 FAM13BQ9NYF5 915 aa24.08■■□□□ 1.45
CASC3-207ENST00000581849 ZFHX2Q9C0A1 2572 aaPredicted RBP24.07■■□□□ 1.44
CASC3-207ENST00000581849 GOLGA8IPA6NC78 632 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 GOLGA8JA6NMD2 632 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 NRG2O14511 850 aaPredicted RBP24.07■■□□□ 1.44
CASC3-207ENST00000581849 DCNP07585 359 aaKnown RBP24.07■■□□□ 1.44
CASC3-207ENST00000581849 EHHADHQ08426 723 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 FAM26FQ5R3K3 315 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 UNC13DQ70J99 1090 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 BCO2Q9BYV7 579 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 SEMA4AQ9H3S1 761 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 BRD9Q9H8M2 597 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 LTB4R2Q9NPC1 389 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 GDAP2Q9NXN4 497 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 AGAP1Q9UPQ3 857 aa24.07■■□□□ 1.44
CASC3-207ENST00000581849 MRPS17Q9Y2R5 130 aaKnown RBP24.07■■□□□ 1.44
CASC3-207ENST00000581849 A0A1W2PRU2 124 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 ZNF233A6NK53 670 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 ME1P48163 572 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 RBP5P82980 135 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 TSPY1Q01534 308 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 NFE2Q16621 373 aaPredicted RBP24.06■■□□□ 1.44
CASC3-207ENST00000581849 FOXD4L5Q5VV16 416 aaPredicted RBP24.06■■□□□ 1.44
CASC3-207ENST00000581849 RESP18Q5W5W9 173 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 VITQ6UXI7 678 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 C1orf210Q8IVY1 113 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 TTC9BQ8N6N2 239 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 LEO1Q8WVC0 666 aaPredicted RBP24.06■■□□□ 1.44
CASC3-207ENST00000581849 FOXD4L4Q8WXT5 416 aaPredicted RBP24.06■■□□□ 1.44
CASC3-207ENST00000581849 NKD2Q969F2 451 aaPredicted RBP24.06■■□□□ 1.44
CASC3-207ENST00000581849 PCIF1Q9H4Z3 704 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 PDE11AQ9HCR9 933 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 ZMYM5Q9UJ78 669 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 PCDHA7Q9UN72 937 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 USP34Q70CQ2 3546 aa24.06■■□□□ 1.44
CASC3-207ENST00000581849 COL4A2P08572 1712 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 PVALEFA0A1B0GWK0 134 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 PRR23AA6NEV1 266 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 NCAM2O15394 837 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 POLR2DO15514 142 aaKnown RBP24.05■■□□□ 1.44
CASC3-207ENST00000581849 HUS1O60921 280 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 TMEM191BP0C7N4 346 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 GLULP15104 373 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 GJA1P17302 382 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 WEE1P30291 646 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 HOXD13P35453 343 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 MLLT6P55198 1093 aaPredicted RBP24.05■■□□□ 1.44
CASC3-207ENST00000581849 MGAT5BQ3V5L5 792 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 ZNF852Q6ZMS4 543 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 TPRG1Q6ZUI0 275 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 FRMD5Q7Z6J6 570 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 LRRTM3Q86VH5 581 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 MFSD6LQ8IWD5 586 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 PDCL2Q8N4E4 241 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 CSGALNACT2Q8N6G5 542 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 TOP6BLQ8N6T0 577 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 GLIS3Q8NEA6 775 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 ANKRD36BP1Q96IX9 119 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 SEPT5Q99719 369 aaPredicted RBP24.05■■□□□ 1.44
CASC3-207ENST00000581849 ACBD6Q9BR61 282 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 SLITRK6Q9H5Y7 841 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 INTS13Q9NVM9 706 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms