RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 MTMR11A4FU01 709 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 K7ENM7 598 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 FGF19O95750 216 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 BMP15O95972 392 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 CYP11A1P05108 521 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 ODC1P11926 461 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 TGM1P22735 817 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 CCNE1P24864 410 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 WEE1P30291 646 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 DDIT3P35638 169 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 LONP1P36776 959 aaKnown RBP11.49□□□□□ -0.57
RFFL-209ENST00000581265 TUFMP49411 452 aaKnown RBP11.49□□□□□ -0.57
RFFL-209ENST00000581265 POU5F1Q01860 360 aaKnown RBP11.49□□□□□ -0.57
RFFL-209ENST00000581265 DHX8Q14562 1220 aaKnown RBP11.49□□□□□ -0.57
RFFL-209ENST00000581265 C9orf57Q5W0N0 161 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 JADE1Q6IE81 842 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 RAD54LQ92698 747 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 MSANTD3Q96H12 275 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 MKNK1Q9BUB5 465 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 ST6GALNAC4Q9H4F1 302 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 C8orf33Q9H7E9 229 aaPredicted RBP11.49□□□□□ -0.57
RFFL-209ENST00000581265 STYXL1Q9Y6J8 313 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 FRYLO94915 3013 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 NCANO14594 1321 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 SPTBN2O15020 2390 aa11.49□□□□□ -0.57
RFFL-209ENST00000581265 DNAH14Q0VDD8 3507 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 ANKRD63C9JTQ0 380 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
RFFL-209ENST00000581265 KRT18P05783 430 aaKnown RBP11.48□□□□□ -0.57
RFFL-209ENST00000581265 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
RFFL-209ENST00000581265 PLCG1P19174 1290 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 CXCL12P48061 93 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 MCM2P49736 904 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 CCR3P51677 355 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 GAS6Q14393 721 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 MCM6Q14566 821 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 TMEM132DQ14C87 1099 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 LARP1BQ659C4 914 aaKnown RBP11.48□□□□□ -0.57
RFFL-209ENST00000581265 LAIR1Q6GTX8 287 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 SLFN12LQ6IEE8 588 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 PRR23BQ6ZRT6 265 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 ITIH5Q86UX2 942 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 YAF2Q8IY57 180 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 SPEM1Q8N4L4 309 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 CELF5Q8N6W0 485 aaKnown RBP11.48□□□□□ -0.57
RFFL-209ENST00000581265 OR10T2Q8NGX3 314 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 CSGALNACT1Q8TDX6 532 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 FAM212AQ96EL1 285 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 LRRC3BQ96PB8 259 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 TMEM209Q96SK2 561 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 CCSER1Q9C0I3 900 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 OBP2AQ9NY56 170 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 DSEQ9UL01 958 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 SMC3Q9UQE7 1217 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 C2CD2Q9Y426 696 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 CHD6Q8TD26 2715 aa11.48□□□□□ -0.57
RFFL-209ENST00000581265 CHD8Q9HCK8 2581 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 ATRXP46100 2492 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 MYBPHLA2RUH7 354 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 PROS1P07225 676 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 NFICP08651 508 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 GABRR2P28476 465 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 NMT1P30419 496 aaKnown RBP11.47□□□□□ -0.57
RFFL-209ENST00000581265 ACOT2P49753 483 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 KPNA1P52294 538 aaPredicted RBP11.47□□□□□ -0.57
RFFL-209ENST00000581265 GRIN1Q05586 938 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 SMARCB1Q12824 385 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 KARSQ15046 597 aaKnown RBP11.47□□□□□ -0.57
RFFL-209ENST00000581265 ARHGAP29Q52LW3 1261 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 ZC2HC1CQ53FD0 456 aaPredicted RBP11.47□□□□□ -0.57
RFFL-209ENST00000581265 STXBP5Q5T5C0 1151 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 ADALQ6DHV7 355 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 ZNF720Q7Z2F6 126 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 BRAPQ7Z569 592 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 RALGPS2Q86X27 583 aaPredicted RBP11.47□□□□□ -0.57
RFFL-209ENST00000581265 TTC9BQ8N6N2 239 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 LARP4BQ92615 738 aaKnown RBP11.47□□□□□ -0.57
RFFL-209ENST00000581265 ZCWPW1Q9H0M4 648 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 ATXN3LQ9H3M9 355 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 ZHX3Q9H4I2 956 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 TASP1Q9H6P5 420 aa11.47□□□□□ -0.57
RFFL-209ENST00000581265 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.47□□□□□ -0.57
RFFL-209ENST00000581265 COL4A2P08572 1712 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 ZFHX4Q86UP3 3567 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 SLC38A8A6NNN8 435 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 SPECC1L-ADORA2AF8WAN1 911 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 DPYSL4O14531 572 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 CYB561D2O14569 222 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 LRP3O75074 770 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 TBCAO75347 108 aaKnown RBP11.46□□□□□ -0.57
RFFL-209ENST00000581265 SOAT2O75908 522 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 PAPSS2O95340 614 aaPredicted RBP11.46□□□□□ -0.57
RFFL-209ENST00000581265 RETP07949 1114 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 SATB1Q01826 763 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 LRRC32Q14392 662 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 POSTNQ15063 836 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 SF3A1Q15459 793 aaKnown RBP11.46□□□□□ -0.57
RFFL-209ENST00000581265 ARHGAP15Q53QZ3 475 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 DGKKQ5KSL6 1271 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 GPR158Q5T848 1215 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms