RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 PCDHB18PQ96TA0 734 aa8.52□□□□□ -1.05
KPNB1-210ENST00000580573 ADAM2Q99965 735 aa8.52□□□□□ -1.05
KPNB1-210ENST00000580573 ELAC1Q9H777 363 aaKnown RBP8.52□□□□□ -1.05
KPNB1-210ENST00000580573 LUC7LQ9NQ29 371 aaKnown RBP8.52□□□□□ -1.05
KPNB1-210ENST00000580573 RNF19AQ9NV58 838 aa8.52□□□□□ -1.05
KPNB1-210ENST00000580573 SLC38A7Q9NVC3 462 aa8.52□□□□□ -1.05
KPNB1-210ENST00000580573 PCDHGC3Q9UN70 934 aa8.52□□□□□ -1.05
KPNB1-210ENST00000580573 AGAP1Q9UPQ3 857 aa8.52□□□□□ -1.05
KPNB1-210ENST00000580573 COL4A4P53420 1690 aaPredicted RBP8.52□□□□□ -1.05
KPNB1-210ENST00000580573 KIAA1671Q9BY89 1806 aa8.52□□□□□ -1.05
KPNB1-210ENST00000580573 BHMG1C9JSJ3 638 aaPredicted RBP8.51□□□□□ -1.05
KPNB1-210ENST00000580573 KRT86O43790 486 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 PQBP1O60828 265 aaKnown RBP8.51□□□□□ -1.05
KPNB1-210ENST00000580573 TACC1O75410 805 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 PAEPP09466 180 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 P4HA1P13674 534 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 PAX3P23760 479 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 MLH1P40692 756 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 MAGEA1P43355 309 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 PDE6CP51160 858 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 RAD23BP54727 409 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 LSM11P83369 360 aaKnown RBP eCLIP8.51□□□□□ -1.05
KPNB1-210ENST00000580573 CENPCQ03188 943 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 TLE2Q04725 743 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 KIF5AQ12840 1032 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 MYO1EQ12965 1108 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 GRIK3Q13003 919 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 WDR72Q3MJ13 1102 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 TRIM60Q495X7 471 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 ARHGAP29Q52LW3 1261 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 GLRA4Q5JXX5 417 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 TMEM270Q6UE05 265 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 TRIM72Q6ZMU5 477 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 DPH6Q7L8W6 267 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 RNF10Q8N5U6 811 aaKnown RBP8.51□□□□□ -1.05
KPNB1-210ENST00000580573 ZNF560Q96MR9 790 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 GAD1Q99259 594 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 ZSWIM1Q9BR11 485 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 SMYD3Q9H7B4 428 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 RSAD1Q9HA92 442 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 ACP6Q9NPH0 428 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 PRDM10Q9NQV6 1147 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 TMEM161AQ9NX61 479 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 MIOSQ9NXC5 875 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 KLK14Q9P0G3 267 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 TRIM10Q9UDY6 481 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 PARP2Q9UGN5 583 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 SALL4Q9UJQ4 1053 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 BARX2Q9UMQ3 279 aaPredicted RBP8.51□□□□□ -1.05
KPNB1-210ENST00000580573 POLIQ9UNA4 740 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 PCDHGC5Q9Y5F6 944 aa8.51□□□□□ -1.05
KPNB1-210ENST00000580573 MKI67P46013 3256 aaKnown RBP8.51□□□□□ -1.05
KPNB1-210ENST00000580573 ANKRD62A6NC57 917 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 DCDC2CA8MYV0 355 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 KIAA0355O15063 1070 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 SPTLC1O15269 473 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 RTN2O75298 545 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 MTA2O94776 668 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 LSM8O95777 96 aaKnown RBP8.5□□□□□ -1.05
KPNB1-210ENST00000580573 TFRCP02786 760 aaKnown RBP8.5□□□□□ -1.05
KPNB1-210ENST00000580573 THP07101 528 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 MMEP08473 750 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 KRT19P08727 400 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 WEE2P0C1S8 567 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 TMEM253P0C7T8 217 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 TNNT1P13805 278 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 GNA15P30679 374 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 RPL9P32969 192 aaKnown RBP8.5□□□□□ -1.05
KPNB1-210ENST00000580573 RFC2P35250 354 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 TAF6P49848 677 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 AFF1P51825 1210 aaKnown RBP8.5□□□□□ -1.05
KPNB1-210ENST00000580573 LILRA4P59901 499 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 USP46P62068 366 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 NOMO3P69849 1222 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 DSC1Q08554 894 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 UPP1Q16831 310 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 CLEC16AQ2KHT3 1053 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 TCTN1Q2MV58 587 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 TUSC1Q2TAM9 212 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 CCDC122Q5T0U0 273 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 LCE2DQ5TA82 110 aaPredicted RBP8.5□□□□□ -1.05
KPNB1-210ENST00000580573 PPP1R2P3Q6NXS1 205 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 CD300LGQ6UXG3 332 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 KIAA1328Q86T90 577 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 UNC93AQ86WB7 457 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 RPUSD2Q8IZ73 545 aaKnown RBP8.5□□□□□ -1.05
KPNB1-210ENST00000580573 SLC4A11Q8NBS3 891 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 DBF4BQ8NFT6 615 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 SPATA18Q8TC71 538 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 KBTBD7Q8WVZ9 684 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 ZNF606Q8WXB4 792 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 LPPQ93052 612 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 CALR3Q96L12 384 aaKnown RBP8.5□□□□□ -1.05
KPNB1-210ENST00000580573 UROC1Q96N76 676 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 TWNKQ96RR1 684 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 WDR24Q96S15 920 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 APOL6Q9BWW8 343 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 PACSIN1Q9BY11 444 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 IRX2Q9BZI1 471 aaPredicted RBP8.5□□□□□ -1.05
KPNB1-210ENST00000580573 HIPK3Q9H422 1215 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms