RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 BCAR1P56945 870 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 ASTE1Q2TB18 679 aaPredicted RBP14.8□□□□□ -0.04
TSEN54-206ENST00000579449 WSCD1Q658N2 575 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 NOP9Q86U38 636 aaKnown RBP14.8□□□□□ -0.04
TSEN54-206ENST00000579449 OSTM1Q86WC4 334 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 CCDC170Q8IYT3 715 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 OR6B3Q8NGW1 331 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 EPS8L1Q8TE68 723 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 SLC20A1Q8WUM9 679 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 SUSD3Q96L08 255 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 TWNKQ96RR1 684 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 YME1L1Q96TA2 773 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 SYT11Q9BT88 431 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 COLEC11Q9BWP8 271 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 SNX25Q9H3E2 840 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 DEF6Q9H4E7 631 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 NOCTQ9UK39 431 aaKnown RBP14.8□□□□□ -0.04
TSEN54-206ENST00000579449 NME7Q9Y5B8 376 aa14.8□□□□□ -0.04
TSEN54-206ENST00000579449 VWA8A3KMH1 1905 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 NT5C1B-RDH14C9J2C7 533 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 M0QZQ0 153 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 AKR1B10O60218 316 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 TADA2AO75478 443 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 GJB5O95377 273 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 PAEPP09466 180 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 ODC1P11926 461 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 CHRNB2P17787 502 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 TNFAIP3P21580 790 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 GNA15P30679 374 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 GNL1P36915 607 aaPredicted RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 PBX3P40426 434 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 KIF11P52732 1056 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 HTRA4P83105 476 aaPredicted RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 ORC1Q13415 861 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 BTG3Q14201 252 aaPredicted RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 SPOUT1Q5T280 376 aaKnown RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 TAF3Q5VWG9 929 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 TMEM86AQ8N2M4 240 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 SLC4A11Q8NBS3 891 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 OLIG1Q8TAK6 271 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 DDX1Q92499 740 aaKnown RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 TMEM176AQ96HP8 235 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 SLC9A7Q96T83 725 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 AGPAT1Q99943 283 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 ZBED2Q9BTP6 218 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 NT5C1AQ9BXI3 368 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 MTIF3Q9H2K0 278 aaKnown RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 MARCH5Q9NX47 278 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 PUF60Q9UHX1 559 aaKnown RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 ADAM28Q9UKQ2 775 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 ZKSCAN5Q9Y2L8 839 aa14.79□□□□□ -0.04
TSEN54-206ENST00000579449 TIMM13Q9Y5L4 95 aaPredicted RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 MRPL42Q9Y6G3 142 aaKnown RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 EPN1Q9Y6I3 576 aaPredicted RBP14.79□□□□□ -0.04
TSEN54-206ENST00000579449 A8MXQ7 604 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 DDX3XO00571 662 aaKnown RBP eCLIP14.78□□□□□ -0.04
TSEN54-206ENST00000579449 GABRDO14764 452 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 THAP12O43422 761 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 HCRTO43612 131 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 NDUFA10O95299 355 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 CYP11A1P05108 521 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 MMEP08473 750 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 PDGFRBP09619 1106 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 ATP2A2P16615 1042 aaKnown RBP14.78□□□□□ -0.04
TSEN54-206ENST00000579449 BRD2P25440 801 aaKnown RBP14.78□□□□□ -0.04
TSEN54-206ENST00000579449 LMO2P25791 158 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 ALDH7A1P49419 539 aaKnown RBP14.78□□□□□ -0.04
TSEN54-206ENST00000579449 CDR2Q01850 454 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 RASIP1Q5U651 963 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 TOGARAM2Q6ZUX3 1019 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 VPS36Q86VN1 386 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 UNC93AQ86WB7 457 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 METTL23Q86XA0 190 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 HERC6Q8IVU3 1022 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 LNX1Q8TBB1 728 aaPredicted RBP14.78□□□□□ -0.04
TSEN54-206ENST00000579449 PHOSPHO2Q8TCD6 241 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 SPTLC3Q9NUV7 552 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 ADAMTS1Q9UHI8 967 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 DSEQ9UL01 958 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 PCDHB8Q9UN66 801 aa14.78□□□□□ -0.04
TSEN54-206ENST00000579449 A0A087X0T9 212 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 ARHGEF37A1IGU5 675 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 EIF3CLB5ME19 914 aaKnown RBP14.77□□□□□ -0.05
TSEN54-206ENST00000579449 TRAPPC3O43617 180 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 FAM228BP0C875 321 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 CD19P15391 556 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 TYMPP19971 482 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 ANXA13P27216 316 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 LHX1P48742 406 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 FMO1Q01740 532 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 GFPT1Q06210 699 aaPredicted RBP14.77□□□□□ -0.05
TSEN54-206ENST00000579449 BMS1Q14692 1282 aaKnown RBP14.77□□□□□ -0.05
TSEN54-206ENST00000579449 C9orf50Q5SZB4 431 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 KCNT2Q6UVM3 1135 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 ACOT1Q86TX2 421 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 TMEM173Q86WV6 379 aaPredicted RBP14.77□□□□□ -0.05
TSEN54-206ENST00000579449 ZNF677Q86XU0 584 aa14.77□□□□□ -0.05
TSEN54-206ENST00000579449 GLYCTKQ8IVS8 523 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms