RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 ZNF280DQ6N043 979 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 C19orf48Q6RUI8 117 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 RAB44Q7Z6P3 723 aaPredicted RBP12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 ELMOD1Q8N336 334 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 ATAD1Q8NBU5 361 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 MCPH1Q8NEM0 835 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 OLIG1Q8TAK6 271 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 PGLYRP2Q96PD5 576 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 SLITRK6Q9H5Y7 841 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 PDRG1Q9NUG6 133 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 EVLQ9UI08 416 aaPredicted RBP12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 PCDHA12Q9UN75 941 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 SLC8A2Q9UPR5 921 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 INVSQ9Y283 1065 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 SLC27A5Q9Y2P5 690 aa12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 TIMM13Q9Y5L4 95 aaPredicted RBP12.22□□□□□ -0.45
SUPT4H1-203ENST00000579289 THADAQ6YHU6 1953 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 SPAARA0A1B0GVQ0 90 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 RHOBTB1O94844 696 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 LARGE1O95461 756 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 ARSAP15289 507 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 ATF6P18850 670 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 ATP2B1P20020 1258 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.458e-14■■■□□ 18.6
SUPT4H1-203ENST00000579289 GABRR2P28476 465 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 MCM2P49736 904 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 COL28A1Q2UY09 1125 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 ADAM32Q8TC27 787 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 ZNF274Q96GC6 653 aaPredicted RBP12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 ADPGKQ9BRR6 497 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 TMEM60Q9H2L4 133 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 EBF3Q9H4W6 596 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 TASP1Q9H6P5 420 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 TTC12Q9H892 705 aaPredicted RBP12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 TUBGCP4Q9UGJ1 667 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 TPCN1Q9ULQ1 816 aa12.21□□□□□ -0.45
SUPT4H1-203ENST00000579289 OBSL1O75147 1896 aa12.21□□□□□ -0.46
SUPT4H1-203ENST00000579289 TSC2P49815 1807 aa12.21□□□□□ -0.46
SUPT4H1-203ENST00000579289 KHNYNO15037 678 aaKnown RBP12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 CTDNEP1O95476 244 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 SEC24BO95487 1268 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 GJA4P35212 333 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 OSTNP61366 133 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 GRSF1Q12849 480 aaKnown RBP eCLIP12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 DMC1Q14565 340 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 ELF2Q15723 593 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 GAB4Q2WGN9 574 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 PEAR1Q5VY43 1037 aaPredicted RBP12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 TRIM22Q8IYM9 498 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 DAW1Q8N136 415 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 CHCHD4Q8N4Q1 142 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 RPLP0P6Q8NHW5 317 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 USP13Q92995 863 aaPredicted RBP12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 FNBP1Q96RU3 617 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 LPIN3Q9BQK8 851 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 HAPLN2Q9GZV7 340 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 ATXN3LQ9H3M9 355 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 SLC38A7Q9NVC3 462 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 ASB3Q9Y575 518 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 CITO14578 2027 aa12.2□□□□□ -0.46
SUPT4H1-203ENST00000579289 APC2O95996 2303 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 APBB3O95704 486 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 F11P03951 625 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 FDPSP14324 419 aaKnown RBP12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 CPB1P15086 417 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 HMGA1P17096 107 aaKnown RBP12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 DRD1P21728 446 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 LRPAP1P30533 357 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 EPHB3P54753 998 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 SCAPQ12770 1279 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 STK3Q13188 491 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 KARSQ15046 597 aaKnown RBP12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 PADI6Q6TGC4 694 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 CMTM8Q8IZV2 173 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 FRMD1Q8N878 549 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 APPL2Q8NEU8 664 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 ZBTB45Q96K62 511 aaPredicted RBP12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 ARHGAP28Q9P2N2 729 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 HSFX1Q9UBD0 423 aa12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 MBD1Q9UIS9 605 aaPredicted RBP12.19□□□□□ -0.46
SUPT4H1-203ENST00000579289 PLXND1Q9Y4D7 1925 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 K7EQS6 105 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 PPEF2O14830 753 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 TADA3O75528 432 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 CD59P13987 128 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 LIG1P18858 919 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 TXKP42681 527 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 EFNA5P52803 228 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 ANAPC15P60006 121 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 SCRN1Q12765 414 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 HAUS6Q7Z4H7 955 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 OR10T2Q8NGX3 314 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 FAM200AQ8TCP9 573 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 TARS2Q9BW92 718 aaKnown RBP12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 TPSD1Q9BZJ3 242 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 TUFT1Q9NNX1 390 aa12.18□□□□□ -0.46
SUPT4H1-203ENST00000579289 PI4KAP42356 2102 aa12.17□□□□□ -0.46
SUPT4H1-203ENST00000579289 ADAMTS9Q9P2N4 1935 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms