RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 RRAGDQ9NQL2 400 aaPredicted RBP5.34□□□□□ -1.55
NF1-219ENST00000579081 TBCCD1Q9NVR7 557 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 SOWAHDA6NJG2 315 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 USP17L5A8MUK1 530 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 RNF103O00237 685 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 PRRG1O14668 218 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 EIF3HO15372 352 aaKnown RBP eCLIP5.34□□□□□ -1.552e-6■■■□□ 15.7
NF1-219ENST00000579081 IL12AP29459 219 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 RAD23BP54727 409 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 CDC16Q13042 620 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 RABGAP1LQ5R372 815 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 SNRNP48Q6IEG0 339 aaKnown RBP5.34□□□□□ -1.55
NF1-219ENST00000579081 CCDC36Q8IYA8 594 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 GRAMD1CQ8IYS0 662 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 HS6ST3Q8IZP7 471 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 ZNF579Q8NAF0 562 aaKnown RBP5.34□□□□□ -1.55
NF1-219ENST00000579081 CHAMP1Q96JM3 812 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 FAR2Q96K12 515 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 ORAI2Q96SN7 254 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 RBBP8Q99708 897 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 COMMD3-BMI1R4GMX3 469 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 TET3O43151 1660 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 PRPF3O43395 683 aaKnown RBP5.34□□□□□ -1.55
NF1-219ENST00000579081 PRLRP16471 622 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 GTF2E2P29084 291 aaKnown RBP5.34□□□□□ -1.55
NF1-219ENST00000579081 RFX8Q6ZV50 586 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 MICU2Q8IYU8 434 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 SH2D3CQ8N5H7 860 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 CYGBQ8WWM9 190 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 PARD6BQ9BYG5 372 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 RIC8BQ9NVN3 520 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 TBX22Q9Y458 520 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 PRAG1Q86YV5 1406 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 UGGT1Q9NYU2 1555 aa5.34□□□□□ -1.55
NF1-219ENST00000579081 ASB14A6NK59 587 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 CHL1O00533 1208 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 TNPO2O14787 897 aaKnown RBP5.34□□□□□ -1.56
NF1-219ENST00000579081 UPP2O95045 317 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 HPGDP15428 266 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 ATP6V1C1P21283 382 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 JAK1P23458 1154 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 CDH6P55285 790 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 TAP1Q03518 808 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 LINC00299Q6ZSB3 139 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 TMEM126BQ8IUX1 230 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 TTLL6Q8N841 843 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 ZNF614Q8N883 585 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 CLMNQ96JQ2 1002 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 TGS1Q96RS0 853 aaKnown RBP5.34□□□□□ -1.56
NF1-219ENST00000579081 INTS2Q9H0H0 1204 aaKnown RBP5.34□□□□□ -1.56
NF1-219ENST00000579081 MYLK2Q9H1R3 596 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 EPN3Q9H201 632 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 RAD21L1Q9H4I0 556 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 IARS2Q9NSE4 1012 aaKnown RBP5.34□□□□□ -1.56
NF1-219ENST00000579081 POLR3EQ9NVU0 708 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 ATP6V1HQ9UI12 483 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 MLH3Q9UHC1 1453 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 HEATR9A2RTY3 570 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 PALMO75781 387 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 WFS1O76024 890 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 YWHAQP27348 245 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 CRKLP46109 303 aaKnown RBP5.34□□□□□ -1.56
NF1-219ENST00000579081 SCRN1Q12765 414 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 RALGDSQ12967 914 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 USP10Q14694 798 aaKnown RBP5.34□□□□□ -1.56
NF1-219ENST00000579081 SLC44A4Q53GD3 710 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 RHOT1Q8IXI2 618 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 PIGOQ8TEQ8 1089 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 FANCEQ9HB96 536 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 PARVAQ9NVD7 372 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 EMC3Q9P0I2 261 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 CEP72Q9P209 647 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 ZFATQ9P243 1243 aa5.34□□□□□ -1.56
NF1-219ENST00000579081 KDM5CP41229 1560 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 LOC102724428A0A0B4J2F2 783 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 CARNS1A5YM72 827 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 TMEM191CA6NGB0 347 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 GUCY1B2O75343 617 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 FCER1AP12319 257 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 ITGAXP20702 1163 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 COPB2P35606 906 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SIK1P57059 783 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SESN2P58004 480 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 SWSAP1Q6NVH7 229 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SFR1Q86XK3 245 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 DGKHQ86XP1 1220 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 TTC29Q8NA56 475 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 TMA16Q96EY4 203 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 ZNF668Q96K58 619 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 SPATA33Q96N06 139 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 ABCB6Q9NP58 842 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 RNF146Q9NTX7 359 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PIM2Q9P1W9 311 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PGK2P07205 417 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 P4HBP07237 508 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 ABCB1P08183 1280 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 DNAJB2P25686 324 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SFNP31947 248 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PTPN21Q16825 1174 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 UGP2Q16851 508 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms