RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 FNBP1Q96RU3 617 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 CGRRF1Q99675 332 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 ZCWPW1Q9H0M4 648 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 KCNH6Q9H252 994 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 KCTD10Q9H3F6 313 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 DMAC2Q9NW81 257 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 PTPRJQ12913 1337 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 GOLGA6L4A6NEF3 574 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 TULP1O00294 542 aaPredicted RBP15.97■□□□□ 0.15
SS18-212ENST00000579061 EXOC3O60645 756 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 HUS1O60921 280 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 KRT19P08727 400 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 EPHA5P54756 1037 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 TWF1Q12792 350 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 DUSP4Q13115 394 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 PRSS36Q5K4E3 855 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 LMBRD2Q68DH5 695 aaPredicted RBP15.97■□□□□ 0.15
SS18-212ENST00000579061 DPH6Q7L8W6 267 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 SUGP1Q8IWZ8 645 aaKnown RBP15.97■□□□□ 0.15
SS18-212ENST00000579061 NPAS3Q8IXF0 933 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 DCP1BQ8IZD4 617 aaKnown RBP15.97■□□□□ 0.15
SS18-212ENST00000579061 SLC44A3Q8N4M1 653 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 TOP6BLQ8N6T0 577 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 RDH13Q8NBN7 331 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 OR5B17Q8NGF7 314 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 TMEM209Q96SK2 561 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 RTP3Q9BQQ7 232 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 GDE1Q9NZC3 331 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 CEP72Q9P209 647 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 YIPF1Q9Y548 306 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 ASB3Q9Y575 518 aa15.97■□□□□ 0.15
SS18-212ENST00000579061 PRR29P0C7W0 189 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 TNNI1P19237 187 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 ALDH1A3P47895 512 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 TUFMP49411 452 aaKnown RBP15.96■□□□□ 0.15
SS18-212ENST00000579061 BFSP1Q12934 665 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 SLC5A9Q2M3M2 681 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 CYP4A22Q5TCH4 519 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 PDZD4Q76G19 769 aaPredicted RBP15.96■□□□□ 0.15
SS18-212ENST00000579061 TRAPPC11Q7Z392 1133 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 PDCL2Q8N4E4 241 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 ATAD1Q8NBU5 361 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 SPPL2BQ8TCT7 592 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 RSAD2Q8WXG1 361 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 PGLYRP2Q96PD5 576 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 ACBD6Q9BR61 282 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 CORO1BQ9BR76 489 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 SMOC2Q9H3U7 446 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 CIZ1Q9ULV3 898 aaPredicted RBP15.96■□□□□ 0.15
SS18-212ENST00000579061 L1RE1Q9UN81 338 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 TRAF3IP3Q9Y228 551 aa15.96■□□□□ 0.15
SS18-212ENST00000579061 KMT2EQ8IZD2 1858 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 GABRDO14764 452 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 DLATP10515 647 aaKnown RBP15.95■□□□□ 0.14
SS18-212ENST00000579061 SRFP11831 508 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 LHX1P48742 406 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 AP3M2P53677 418 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 EPHB3P54753 998 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 MYL7Q01449 175 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 TSPY1Q01534 308 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 NFIL3Q16649 462 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 SLC39A12Q504Y0 691 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 LIMS2Q7Z4I7 341 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 FMR1NBQ8N0W7 255 aaPredicted RBP15.95■□□□□ 0.14
SS18-212ENST00000579061 GUF1Q8N442 669 aaKnown RBP15.95■□□□□ 0.14
SS18-212ENST00000579061 HPDLQ96IR7 371 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 FAM84AQ96KN4 292 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 CRISPLD1Q9H336 500 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 ASAH2Q9NR71 780 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 WNT16Q9UBV4 365 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 SNX9Q9Y5X1 595 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 NUMBLQ9Y6R0 609 aa15.95■□□□□ 0.14
SS18-212ENST00000579061 CALUO43852 315 aaPredicted RBP15.94■□□□□ 0.14
SS18-212ENST00000579061 FAM163BP0C2L3 166 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 CLDN10P78369 228 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 NFE2Q16621 373 aaPredicted RBP15.94■□□□□ 0.14
SS18-212ENST00000579061 SCARA3Q6AZY7 606 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 ITIH5Q86UX2 942 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 LRRTM3Q86VH5 581 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 ENGASEQ8NFI3 743 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 PARD3BQ8TEW8 1205 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 FGF14Q92915 247 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 CCDC127Q96BQ5 260 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 TIGD1Q96MW7 591 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 GZF1Q9H116 711 aaPredicted RBP15.94■□□□□ 0.14
SS18-212ENST00000579061 DNAJC25Q9H1X3 360 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 SLC2A4RGQ9NR83 387 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 DDX43Q9NXZ2 648 aaKnown RBP15.94■□□□□ 0.14
SS18-212ENST00000579061 RAPGEFL1Q9UHV5 662 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 SLC27A5Q9Y2P5 690 aa15.94■□□□□ 0.14
SS18-212ENST00000579061 MAPK13O15264 365 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 NARSO43776 548 aaKnown RBP15.93■□□□□ 0.14
SS18-212ENST00000579061 ECI2O75521 394 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 FGF19O95750 216 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 STAU1O95793 577 aaKnown RBP15.93■□□□□ 0.14
SS18-212ENST00000579061 NR3C1P04150 777 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 CEBPBP17676 345 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 PCSK1P29120 753 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 CCR2P41597 374 aa15.93■□□□□ 0.14
SS18-212ENST00000579061 FAM160A1Q05DH4 1040 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms