RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, human

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCE1-215	ENST00000578995	ADRB2	P07550	413 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	SRGAP2C	P0DJJ0	459 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	GAP43	P17677	238 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	TMOD1	P28289	359 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	ADSS	P30520	456 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	MCM4	P33991	863 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	AFM	P43652	599 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	GATM	P50440	423 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	DNM2	P50570	870 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	CDC42EP1	Q00587	391 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	PRKCQ	Q04759	706 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	STK4	Q13043	487 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	PNOC	Q13519	176 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	DHX8	Q14562	1220 aa	Known RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	KCNB1	Q14721	858 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	POSTN	Q15063	836 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	COBLL1	Q53SF7	1204 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	XKR4	Q5GH76	650 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	CLLU1OS	Q5K130	101 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	ZBTB41	Q5SVQ8	909 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	SLC23A3	Q6PIS1	610 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	ZPBP2	Q6X784	338 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	AGMO	Q6ZNB7	445 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	SV2B	Q7L1I2	683 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	ZNF720	Q7Z2F6	126 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	HAUS6	Q7Z4H7	955 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	RSPH3	Q86UC2	560 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	CDR2L	Q86X02	465 aa	Predicted RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	TMEM192	Q8IY95	271 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	SIX5	Q8N196	739 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	CEP120	Q8N960	986 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	ZSWIM2	Q8NEG5	633 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	ZNF507	Q8TCN5	953 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	NETO1	Q8TDF5	533 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	TMEM174	Q8WUU8	243 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	SCFD1	Q8WVM8	642 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	APBB2	Q92870	758 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	ERCC4	Q92889	916 aa	Predicted RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	TOP1MT	Q969P6	601 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	HVCN1	Q96D96	273 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	CDK5RAP3	Q96JB5	506 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	PRIMPOL	Q96LW4	560 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	MAP7D2	Q96T17	732 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	ACO2	Q99798	780 aa	Known RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	EIF2A	Q9BY44	585 aa	Known RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	CDT1	Q9H211	546 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	KCTD10	Q9H3F6	313 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	CLSTN2	Q9H4D0	955 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	PARVG	Q9HBI0	331 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	PARD6A	Q9NPB6	346 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	DACT1	Q9NYF0	836 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	FAM13B	Q9NYF5	915 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	CRIM1	Q9NZV1	1036 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	TMEM63C	Q9P1W3	806 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	SEL1L	Q9UBV2	794 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	TNFSF13B	Q9Y275	285 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	YBX2	Q9Y2T7	364 aa	Known RBP	4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	PCDHA5	Q9Y5H7	936 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995	PRUNE2	Q8WUY3	3088 aa		4.16	□□□□□ -1.74
SMARCE1-215	ENST00000578995		A0A0B4J269	797 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	DENND3	A2RUS2	1198 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	LRRIQ4	A6NIV6	560 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	GRXCR1	A8MXD5	290 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	INO80B-WBP1	J3KQ70	363 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	PTGES	O14684	152 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	GPR182	O15218	404 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	EIF3D	O15371	548 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	GJB5	O95377	273 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	FGB	P02675	491 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	RPN1	P04843	607 aa	Known RBP	4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	TMEM253	P0C7T8	217 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	DRD2	P14416	443 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	SFPQ	P23246	707 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	IGFBP6	P24592	240 aa	Predicted RBP	4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	AXL	P30530	894 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	SCNN1A	P37088	669 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	EFNA5	P52803	228 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	PMS1	P54277	932 aa	Known RBP	4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	MCL1	Q07820	350 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	C19orf57	Q0VDD7	668 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	PAK2	Q13177	524 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	DMP1	Q13316	513 aa	Predicted RBP	4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	MORC3	Q14149	939 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	TFDP1	Q14186	410 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	PPP2R5A	Q15172	486 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	LRIT3	Q3SXY7	679 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	FAM26F	Q5R3K3	315 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	EXOSC6	Q5RKV6	272 aa	Known RBP	4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	ODR4	Q5SWX8	454 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	L1TD1	Q5T7N2	865 aa	Known RBP	4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	SCARA3	Q6AZY7	606 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	CD300LG	Q6UXG3	332 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	ALKAL1	Q6UXT8	129 aa		4.15	□□□□□ -1.75
SMARCE1-215	ENST00000578995	PRR23B	Q6ZRT6	265 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms