RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 MAP7D1Q3KQU3 841 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 Q4G0T1 1027 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 C11orf74Q86VG3 221 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 TMTC2Q8N394 836 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 CEP120Q8N960 986 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 TBCKQ8TEA7 893 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 USP33Q8TEY7 942 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 ACDQ96AP0 544 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 DYDC2Q96IM9 177 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 LPIN3Q9BQK8 851 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 MTA3Q9BTC8 594 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 IL21Q9HBE4 155 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
GGA3-206ENST00000578773 PCDHB9Q9Y5E1 797 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 TCHHQ07283 1943 aa12.17□□□□□ -0.46
GGA3-206ENST00000578773 BOD1L1Q8NFC6 3051 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 GOLGA8AA7E2F4 631 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 GOLGA8BA8MQT2 603 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 PODXLO00592 558 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 MAP3K13O43283 966 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 SERPINF2P08697 491 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
GGA3-206ENST00000578773 CLDN6P56747 220 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 CYP4A11Q02928 519 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 KCNC4Q03721 635 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 GFPT1Q06210 699 aaPredicted RBP12.16□□□□□ -0.46
GGA3-206ENST00000578773 MESP2Q0VG99 397 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 TFDP1Q14186 410 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 NBR1Q14596 966 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 PCBP1Q15365 356 aaKnown RBP eCLIP12.16□□□□□ -0.46
GGA3-206ENST00000578773 DUOXA1Q1HG43 343 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 DNAJB7Q7Z6W7 309 aaPredicted RBP12.16□□□□□ -0.46
GGA3-206ENST00000578773 STKLD1Q8NE28 680 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 BEST2Q8NFU1 509 aa12.16□□□□□ -0.46
GGA3-206ENST00000578773 USP13Q92995 863 aaPredicted RBP12.16□□□□□ -0.46
GGA3-206ENST00000578773 C18orf25Q96B23 403 aaPredicted RBP12.16□□□□□ -0.46
GGA3-206ENST00000578773 ZMAT2Q96NC0 199 aaKnown RBP12.16□□□□□ -0.46
GGA3-206ENST00000578773 POLR3FQ9H1D9 316 aaPredicted RBP12.16□□□□□ -0.46
GGA3-206ENST00000578773 TIMM13Q9Y5L4 95 aaPredicted RBP12.16□□□□□ -0.46
GGA3-206ENST00000578773 ANKRD17O75179 2603 aaKnown RBP12.16□□□□□ -0.46
GGA3-206ENST00000578773 RELNP78509 3460 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 LRRIQ4A6NIV6 560 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 K7EQS6 105 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 TRAPPC3O43617 180 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 CHMLP26374 656 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 NMT1P30419 496 aaKnown RBP12.15□□□□□ -0.46
GGA3-206ENST00000578773 HDAC1Q13547 482 aaPredicted RBP12.15□□□□□ -0.46
GGA3-206ENST00000578773 MXD4Q14582 209 aaPredicted RBP12.15□□□□□ -0.46
GGA3-206ENST00000578773 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 MAEAQ7L5Y9 396 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 FMNL3Q8IVF7 1028 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 BSNDQ8WZ55 320 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 CD101Q93033 1021 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 TASP1Q9H6P5 420 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 IL21RQ9HBE5 538 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 VPS54Q9P1Q0 977 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 PCOLCE2Q9UKZ9 415 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 APOBEC2Q9Y235 224 aaKnown RBP12.15□□□□□ -0.46
GGA3-206ENST00000578773 KNTC1P50748 2209 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 NID2Q14112 1375 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 KNL1Q8NG31 2342 aa12.15□□□□□ -0.46
GGA3-206ENST00000578773 CABIN1Q9Y6J0 2220 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 SMIM28A0A1B0GU29 152 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 H7C4K7 107 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 SYN3O14994 580 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 ZBTB43O43298 467 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 LIG1P18858 919 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 USP11P51784 963 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 POU5F1BQ06416 359 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 PPP2R5CQ13362 524 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 PLD1Q13393 1074 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 CRY1Q16526 586 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 FBXO43Q4G163 708 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 ZNF280DQ6N043 979 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 TMEM150AQ86TG1 271 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 CHD1LQ86WJ1 897 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 SLC41A1Q8IVJ1 513 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 C4orf19Q8IY42 314 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 ATAD1Q8NBU5 361 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 DDX12PQ92771 950 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 NFKBIZQ9BYH8 718 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 CD93Q9NPY3 652 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 THG1LQ9NWX6 298 aaKnown RBP12.14□□□□□ -0.47
GGA3-206ENST00000578773 MMP17Q9ULZ9 603 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 WNT6Q9Y6F9 365 aa12.14□□□□□ -0.47
GGA3-206ENST00000578773 BSNQ9UPA5 3926 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 CYP3A7-CYP3A51PA0A087WV96 503 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 SGK1O00141 431 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 PLK4O00444 970 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 SLC27A2O14975 620 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 N4BP3O15049 544 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 SGSM2O43147 1006 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 DKK1O94907 266 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 WISP1O95388 367 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 P4HBP07237 508 aaKnown RBP12.13□□□□□ -0.47
GGA3-206ENST00000578773 ATF6P18850 670 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 CYP3A7P24462 503 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms