RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 ROR1Q01973 937 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 ITIH3Q06033 890 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 DLX2Q07687 328 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-208ENST00000578630 GPR17Q13304 367 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 SOWAHAQ2M3V2 549 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 ATAT1Q5SQI0 421 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 LIN9Q5TKA1 542 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 SCARA3Q6AZY7 606 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 RSPO2Q6UXX9 243 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-208ENST00000578630 CYP26C1Q6V0L0 522 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 SPATA31D4Q6ZUB0 917 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 FBXL13Q8NEE6 735 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 VN1R2Q8NFZ6 395 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 FAXDC2Q96IV6 333 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 MSLNLQ96KJ4 702 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 ACBD6Q9BR61 282 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 DNAI2Q9GZS0 605 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 XYLT2Q9H1B5 865 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 SNX25Q9H3E2 840 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 SFXN1Q9H9B4 322 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 MAN1C1Q9NR34 630 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 RAB20Q9NX57 234 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 DDX43Q9NXZ2 648 aaKnown RBP12.36□□□□□ -0.43
ERBB2-208ENST00000578630 AFF4Q9UHB7 1163 aaKnown RBP12.36□□□□□ -0.43
ERBB2-208ENST00000578630 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 TRANK1O15050 2925 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 ANK1P16157 1881 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 PDCD11Q14690 1871 aaKnown RBP12.36□□□□□ -0.43
ERBB2-208ENST00000578630 COL4A4P53420 1690 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-208ENST00000578630 CCDC195A0A1B0GUA6 201 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 GABRDO14764 452 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 PMM2O15305 246 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 P4HA2O15460 535 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 TBX10O75333 385 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 TACC1O75410 805 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 AFPP02771 609 aaKnown RBP12.35□□□□□ -0.43
ERBB2-208ENST00000578630 PRKCSHP14314 528 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-208ENST00000578630 TRIM21P19474 475 aaKnown RBP12.35□□□□□ -0.43
ERBB2-208ENST00000578630 MTIF2P46199 727 aaKnown RBP12.35□□□□□ -0.43
ERBB2-208ENST00000578630 RBM10P98175 930 aaKnown RBP12.35□□□□□ -0.43
ERBB2-208ENST00000578630 TYRO3Q06418 890 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 KCNH2Q12809 1159 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 PPM1LQ5SGD2 360 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 TRIM59Q8IWR1 403 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.35□□□□□ -0.43
ERBB2-208ENST00000578630 ADGRF2Q8IZF7 708 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 OR6B3Q8NGW1 331 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 TAS1R2Q8TE23 839 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 SLC35C1Q96A29 364 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 ASB2Q96Q27 587 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 ADAM7Q9H2U9 754 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 CYP4F11Q9HBI6 524 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 ZDHHC7Q9NXF8 308 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 SCN1AP35498 2009 aa12.35□□□□□ -0.43
ERBB2-208ENST00000578630 WDR27A2RRH5 827 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 PRRG1O14668 218 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 ZMYND10O75800 440 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 ASS1P00966 412 aaKnown RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 HNRNPA1P09651 372 aaKnown RBP eCLIP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 WARSP23381 471 aaKnown RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 FMO5P49326 533 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 TFF2Q03403 129 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 ADCY1Q08828 1119 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 SMAD4Q13485 552 aaKnown RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 NFKBIBQ15653 356 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 CLUL1Q15846 466 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 NFE2Q16621 373 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 RARS2Q5T160 578 aaKnown RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 PTCRAQ6ISU1 281 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 SYCE2Q6PIF2 218 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 LIMS2Q7Z4I7 341 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 TCEAL8Q8IYN2 117 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 TTC39CQ8N584 583 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 C12orf76Q8N812 135 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 CMASQ8NFW8 434 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 C2orf15Q8WU43 125 aaKnown RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 CNOT6LQ96LI5 555 aaKnown RBP12.34□□□□□ -0.43
ERBB2-208ENST00000578630 RIPOR3Q96MK2 946 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 MED15Q96RN5 788 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 ZCWPW1Q9H0M4 648 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 S1PR5Q9H228 398 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 CYP3A43Q9HB55 503 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 PIDD1Q9HB75 910 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 FBXW11Q9UKB1 542 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 COQ4Q9Y3A0 265 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 NFE2L3Q9Y4A8 694 aa12.34□□□□□ -0.43
ERBB2-208ENST00000578630 GRXCR2A6NFK2 248 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 SMTNL1A8MU46 457 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 A8MXQ7 604 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 MBTPS2O43462 519 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 XYLBO75191 536 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 LRG1P02750 347 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 C8AP07357 584 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 TPM2P07951 284 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 PDGFRBP09619 1106 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 OR4Q2P0C623 313 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 HOXA9P31269 272 aa12.33□□□□□ -0.44
ERBB2-208ENST00000578630 MTHFRP42898 656 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms