RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 SEC24AO95486 1093 aa23.3■■□□□ 1.32
CDC42EP4-203ENST00000578516 MYO1EQ12965 1108 aa23.3■■□□□ 1.32
CDC42EP4-203ENST00000578516 FILIP1Q7Z7B0 1213 aa23.3■■□□□ 1.32
CDC42EP4-203ENST00000578516 SLC35C1Q96A29 364 aa23.3■■□□□ 1.32
CDC42EP4-203ENST00000578516 ASB2Q96Q27 587 aa23.3■■□□□ 1.32
CDC42EP4-203ENST00000578516 APOBEC3GQ9HC16 384 aaKnown RBP23.3■■□□□ 1.32
CDC42EP4-203ENST00000578516 R3HCC1Q9Y3T6 440 aaKnown RBP23.3■■□□□ 1.32
CDC42EP4-203ENST00000578516 HUS1O60921 280 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 MXI1P50539 228 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 CDH8P55286 799 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 MRPS5P82675 430 aaKnown RBP23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 WDR72Q3MJ13 1102 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 LRRTM3Q86VH5 581 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 METTL23Q86XA0 190 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 IRF2BP1Q8IU81 584 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 SLC7A14Q8TBB6 771 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 CNOT6LQ96LI5 555 aaKnown RBP23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 MMS19Q96T76 1030 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 LPIN3Q9BQK8 851 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 TMEM8AQ9HCN3 771 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 TMLHEQ9NVH6 421 aa23.29■■□□□ 1.32
CDC42EP4-203ENST00000578516 IKBKBO14920 756 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 SOAT2O75908 522 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 C8AP07357 584 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 SRGAP2BP0DMP2 458 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 LMO2P25791 158 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 AP3M2P53677 418 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 PSMC1P62191 440 aaKnown RBP23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 SMAD4Q13485 552 aaKnown RBP23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 FOXR2Q6PJQ5 311 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 LIMS2Q7Z4I7 341 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 TOP6BLQ8N6T0 577 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 ATXN2LQ8WWM7 1075 aaKnown RBP23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 SYAP1Q96A49 352 aaPredicted RBP23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 SFXN1Q9H9B4 322 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 DZANK1Q9NVP4 752 aa23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 DDX43Q9NXZ2 648 aaKnown RBP23.28■■□□□ 1.32
CDC42EP4-203ENST00000578516 CCL16O15467 120 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 ATP2C2O75185 946 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 ASS1P00966 412 aaKnown RBP23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 SP100P23497 879 aaPredicted RBP23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 MCCD1P59942 119 aaPredicted RBP23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 TNNC1P63316 161 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 ADCY1Q08828 1119 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 SASS6Q6UVJ0 657 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 FRMD5Q7Z6J6 570 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 CREBRFQ8IUR6 639 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 TRIM59Q8IWR1 403 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 ZNF707Q96C28 371 aaPredicted RBP23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 ZCWPW1Q9H0M4 648 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 DNAJC25Q9H1X3 360 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 DSEQ9UL01 958 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 C5orf42Q9H799 3197 aa23.27■■□□□ 1.32
CDC42EP4-203ENST00000578516 FSD2A1L4K1 749 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 MTMR11A4FU01 709 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 OR6C75A6NL08 312 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 ABLIM3O94929 683 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 BMP1P13497 986 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 NOP14P78316 857 aaKnown RBP23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 TYRO3Q06418 890 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 ORC1Q13415 861 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 STX1AQ16623 288 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 KLHL40Q2TBA0 621 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 SLC39A12Q504Y0 691 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 ZNF667Q5HYK9 610 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 KRT39Q6A163 491 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 ATAD1Q8NBU5 361 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 RHOBTB2Q9BYZ6 727 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 DPEP3Q9H4B8 488 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 CYP4F11Q9HBI6 524 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 HMGXB4Q9UGU5 601 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 DOCK8Q8NF50 2099 aa23.26■■□□□ 1.31
CDC42EP4-203ENST00000578516 CCDC195A0A1B0GUA6 201 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 GABRDO14764 452 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 ZMYND10O75800 440 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 STAU1O95793 577 aaKnown RBP23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 PDGFRBP09619 1106 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 PAX3P23760 479 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 ATICP31939 592 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 ASPAP45381 313 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 NTHL1P78549 312 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 MYL7Q01449 175 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 ENPEPQ07075 957 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 LIN9Q5TKA1 542 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 ZNF461Q8TAF7 563 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 SUSD6Q92537 303 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 POMKQ9H5K3 350 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 VRTNQ9H8Y1 702 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 SAMSN1Q9NSI8 373 aaKnown RBP23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 SLC27A5Q9Y2P5 690 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 MYH10P35580 1976 aa23.25■■□□□ 1.31
CDC42EP4-203ENST00000578516 ARHGEF37A1IGU5 675 aa23.24■■□□□ 1.31
CDC42EP4-203ENST00000578516 WARSP23381 471 aaKnown RBP23.24■■□□□ 1.31
CDC42EP4-203ENST00000578516 GTF2H1P32780 548 aa23.24■■□□□ 1.31
CDC42EP4-203ENST00000578516 FMO5P49326 533 aa23.24■■□□□ 1.31
CDC42EP4-203ENST00000578516 TPD52L1Q16890 204 aaPredicted RBP23.24■■□□□ 1.31
CDC42EP4-203ENST00000578516 PPM1LQ5SGD2 360 aa23.24■■□□□ 1.31
CDC42EP4-203ENST00000578516 THEM5Q8N1Q8 247 aa23.24■■□□□ 1.31
CDC42EP4-203ENST00000578516 STKLD1Q8NE28 680 aa23.24■■□□□ 1.31
CDC42EP4-203ENST00000578516 TATDN2Q93075 761 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms