RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 TBKBP1A7MCY6 615 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 CYB561D2O14569 222 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 MED7O43513 233 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 TRAPPC3O43617 180 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 DDHD2O94830 711 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 ODC1P11926 461 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 GNA15P30679 374 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 CDH8P55286 799 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 STILQ15468 1287 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 SOWAHAQ2M3V2 549 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 ZNF662Q6ZS27 426 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 TOGARAM2Q6ZUX3 1019 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 NOP9Q86U38 636 aaKnown RBP14.31□□□□□ -0.12
SRSF1-202ENST00000578430 SLC47A2Q86VL8 602 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 ZNF280BQ86YH2 543 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 SLC30A5Q8TAD4 765 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 DDX1Q92499 740 aaKnown RBP14.31□□□□□ -0.12
SRSF1-202ENST00000578430 TMEM176AQ96HP8 235 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 SUSD3Q96L08 255 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.31□□□□□ -0.12
SRSF1-202ENST00000578430 COLEC11Q9BWP8 271 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 NT5C1AQ9BXI3 368 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 SNX25Q9H3E2 840 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 NRDE2Q9H7Z3 1164 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 ADAMTS1Q9UHI8 967 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 PPP2R2CQ9Y2T4 447 aa14.31□□□□□ -0.12
SRSF1-202ENST00000578430 A0A087X0T9 212 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 M0QZQ0 153 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 DDX3XO00571 662 aaKnown RBP eCLIP14.3□□□□□ -0.123e-29■■□□□ 14.3
SRSF1-202ENST00000578430 ALDH2P05091 517 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 CYP11A1P05108 521 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 FAM228BP0C875 321 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 ACRP10323 421 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 VDRP11473 427 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 GZMAP12544 262 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 RAP1GAPP47736 663 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 OR1G1P47890 313 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 LHX1P48742 406 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 NDST1P52848 882 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 RAD23BP54727 409 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 ALKBH5Q6P6C2 394 aaKnown RBP14.3□□□□□ -0.12
SRSF1-202ENST00000578430 METTL23Q86XA0 190 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 CMTR2Q8IYT2 770 aaKnown RBP14.3□□□□□ -0.12
SRSF1-202ENST00000578430 ADGRF2Q8IZF7 708 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 CCAR2Q8N163 923 aaKnown RBP14.3□□□□□ -0.12
SRSF1-202ENST00000578430 WHAMMQ8TF30 809 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 ZNF689Q96CS4 500 aaPredicted RBP14.3□□□□□ -0.12
SRSF1-202ENST00000578430 LBHD1Q9BQE6 289 aaPredicted RBP14.3□□□□□ -0.12
SRSF1-202ENST00000578430 MTIF3Q9H2K0 278 aaKnown RBP14.3□□□□□ -0.12
SRSF1-202ENST00000578430 SPTLC3Q9NUV7 552 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 NAGPAQ9UK23 515 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 INTUQ9ULD6 942 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 L1RE1Q9UN81 338 aa14.3□□□□□ -0.12
SRSF1-202ENST00000578430 GABRDO14764 452 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 THAP12O43422 761 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 UPP2O95045 317 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 LSM8O95777 96 aaKnown RBP14.29□□□□□ -0.12
SRSF1-202ENST00000578430 CHRNB2P17787 502 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 TYMPP19971 482 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 GNL1P36915 607 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-202ENST00000578430 MAGEA1P43355 309 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 FMO1Q01740 532 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 ELAVL2Q12926 359 aaKnown RBP14.29□□□□□ -0.12
SRSF1-202ENST00000578430 TMEM240Q5SV17 173 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 CD300LGQ6UXG3 332 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 ZNF365Q70YC5 407 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 GPIHBP1Q8IV16 184 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 GLYCTKQ8IVS8 523 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 CRYBG2Q8N1P7 616 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 PDCL2Q8N4E4 241 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 SLC4A11Q8NBS3 891 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 C3orf58Q8NDZ4 430 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 OR6B3Q8NGW1 331 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 KBTBD7Q8WVZ9 684 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 ZNF606Q8WXB4 792 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 HERVK_113Q902F9 699 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 TNIP3Q96KP6 325 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 MRPL45Q9BRJ2 306 aaKnown RBP14.29□□□□□ -0.12
SRSF1-202ENST00000578430 PAAF1Q9BRP4 392 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 DESI2Q9BSY9 194 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 TSGA10Q9BZW7 698 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 ELOVL4Q9GZR5 314 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 PDCL3Q9H2J4 239 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 NENFQ9UMX5 172 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 PCDHGC3Q9UN70 934 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 FAN1Q9Y2M0 1017 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 PCDHA13Q9Y5I0 950 aa14.29□□□□□ -0.12
SRSF1-202ENST00000578430 FNDC1Q4ZHG4 1894 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-202ENST00000578430 LAMA3Q16787 3333 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 A8MXQ7 604 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 SOX1O00570 391 aaPredicted RBP14.28□□□□□ -0.12
SRSF1-202ENST00000578430 NRP1O14786 923 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 ZNF263O14978 683 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 ZNF500O60304 480 aaPredicted RBP14.28□□□□□ -0.12
SRSF1-202ENST00000578430 KIF4AO95239 1232 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 MMEP08473 750 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 PCSK1P29120 753 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 GATMP50440 423 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms