RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 LIMS2Q7Z4I7 341 aa24.83■■□□□ 1.57
LIMD2-204ENST00000578297 FAM186BQ8IYM0 893 aa24.83■■□□□ 1.57
LIMD2-204ENST00000578297 DHTKD1Q96HY7 919 aaPredicted RBP24.83■■□□□ 1.57
LIMD2-204ENST00000578297 GBP4Q96PP9 640 aa24.83■■□□□ 1.57
LIMD2-204ENST00000578297 TMEM209Q96SK2 561 aa24.83■■□□□ 1.57
LIMD2-204ENST00000578297 ZCWPW1Q9H0M4 648 aa24.83■■□□□ 1.57
LIMD2-204ENST00000578297 CLUHO75153 1309 aa24.83■■□□□ 1.56
LIMD2-204ENST00000578297 PSMA7O14818 248 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 CETN3O15182 167 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 STAU1O95793 577 aaKnown RBP24.82■■□□□ 1.56
LIMD2-204ENST00000578297 BMP6P22004 513 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 ATICP31939 592 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 VAMP7P51809 220 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 MCCD1P59942 119 aaPredicted RBP24.82■■□□□ 1.56
LIMD2-204ENST00000578297 LRRC63Q05C16 580 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 TRPC3Q13507 836 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 SOWAHAQ2M3V2 549 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 TDRD10Q5VZ19 366 aaKnown RBP24.82■■□□□ 1.56
LIMD2-204ENST00000578297 ANKRD40Q6AI12 368 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 MKNK1Q9BUB5 465 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 LMBRD1Q9NUN5 540 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 KIAA1468Q9P260 1216 aa24.82■■□□□ 1.56
LIMD2-204ENST00000578297 C2CD4DB7Z1M9 353 aa24.81■■□□□ 1.56
LIMD2-204ENST00000578297 PHACTR2O75167 634 aa24.81■■□□□ 1.56
LIMD2-204ENST00000578297 VNN2O95498 520 aa24.81■■□□□ 1.56
LIMD2-204ENST00000578297 KRT13P13646 458 aa24.81■■□□□ 1.56
LIMD2-204ENST00000578297 CD44P16070 742 aaKnown RBP24.81■■□□□ 1.56
LIMD2-204ENST00000578297 SP100P23497 879 aaPredicted RBP24.81■■□□□ 1.56
LIMD2-204ENST00000578297 CCNE1P24864 410 aa24.81■■□□□ 1.56
LIMD2-204ENST00000578297 PMS1P54277 932 aaKnown RBP24.81■■□□□ 1.56
LIMD2-204ENST00000578297 CAMK4Q16566 473 aa24.81■■□□□ 1.56
LIMD2-204ENST00000578297 C1orf220Q5T0J3 134 aa24.81■■□□□ 1.56
LIMD2-204ENST00000578297 RNF135Q8IUD6 432 aa24.81■■□□□ 1.56
LIMD2-204ENST00000578297 ZC3H3Q8IXZ2 948 aaKnown RBP24.81■■□□□ 1.56
LIMD2-204ENST00000578297 PGLYRP2Q96PD5 576 aa24.81■■□□□ 1.56
LIMD2-204ENST00000578297 INSL5Q9Y5Q6 135 aa24.81■■□□□ 1.56
LIMD2-204ENST00000578297 MTMR11A4FU01 709 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 BIN1O00499 593 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 GABRDO14764 452 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 LRG1P02750 347 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 LHX1P48742 406 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 MYL6P60660 151 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 FKBP3Q00688 224 aaKnown RBP24.8■■□□□ 1.56
LIMD2-204ENST00000578297 SMARCB1Q12824 385 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 BIRC3Q13489 604 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 ZACNQ401N2 412 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 SLC39A12Q504Y0 691 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 OTOP3Q7RTS5 596 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 GRASPQ7Z6J2 395 aaPredicted RBP24.8■■□□□ 1.56
LIMD2-204ENST00000578297 ADGRF2Q8IZF7 708 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 PLCD3Q8N3E9 789 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 TRIML1Q8N9V2 468 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 TDRD5Q8NAT2 981 aaKnown RBP24.8■■□□□ 1.56
LIMD2-204ENST00000578297 KHSRPQ92945 711 aaKnown RBP eCLIP24.8■■□□□ 1.56
LIMD2-204ENST00000578297 SYAP1Q96A49 352 aaPredicted RBP24.8■■□□□ 1.56
LIMD2-204ENST00000578297 ACSF2Q96CM8 615 aaPredicted RBP24.8■■□□□ 1.56
LIMD2-204ENST00000578297 ACBD6Q9BR61 282 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 XYLT2Q9H1B5 865 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 VRTNQ9H8Y1 702 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 DDX43Q9NXZ2 648 aaKnown RBP24.8■■□□□ 1.56
LIMD2-204ENST00000578297 HSFX1Q9UBD0 423 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 POLIQ9UNA4 740 aa24.8■■□□□ 1.56
LIMD2-204ENST00000578297 PPP1R3GB7ZBB8 358 aa24.79■■□□□ 1.56
LIMD2-204ENST00000578297 DUSP4Q13115 394 aa24.79■■□□□ 1.56
LIMD2-204ENST00000578297 NCOA4Q13772 614 aa24.79■■□□□ 1.56
LIMD2-204ENST00000578297 SV2AQ7L0J3 742 aa24.79■■□□□ 1.56
LIMD2-204ENST00000578297 DCP1BQ8IZD4 617 aaKnown RBP24.79■■□□□ 1.56
LIMD2-204ENST00000578297 ZDHHC14Q8IZN3 488 aa24.79■■□□□ 1.56
LIMD2-204ENST00000578297 EEF2KMTQ96G04 330 aa24.79■■□□□ 1.56
LIMD2-204ENST00000578297 TRIM49BA6NDI0 452 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 VNN1O95497 513 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 FAM163BP0C2L3 166 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 EPB41P11171 864 aaKnown RBP24.78■■□□□ 1.56
LIMD2-204ENST00000578297 MYL7Q01449 175 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 TSPY1Q01534 308 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 WDR72Q3MJ13 1102 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 FOXR2Q6PJQ5 311 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 LRRTM3Q86VH5 581 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 ATAD1Q8NBU5 361 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 C2orf15Q8WU43 125 aaKnown RBP24.78■■□□□ 1.56
LIMD2-204ENST00000578297 KBTBD7Q8WVZ9 684 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 MMS19Q96T76 1030 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 CRISPLD1Q9H336 500 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 CLSTN2Q9H4D0 955 aa24.78■■□□□ 1.56
LIMD2-204ENST00000578297 DNMT3BQ9UBC3 853 aaKnown RBP24.78■■□□□ 1.56
LIMD2-204ENST00000578297 PI4K2BG5E9Z4 385 aa24.77■■□□□ 1.56
LIMD2-204ENST00000578297 SLC16A3O15427 465 aaKnown RBP24.77■■□□□ 1.56
LIMD2-204ENST00000578297 N4BP1O75113 896 aaKnown RBP24.77■■□□□ 1.56
LIMD2-204ENST00000578297 TNNC1P63316 161 aa24.77■■□□□ 1.56
LIMD2-204ENST00000578297 TWF1Q12792 350 aa24.77■■□□□ 1.56
LIMD2-204ENST00000578297 OSTM1Q86WC4 334 aa24.77■■□□□ 1.56
LIMD2-204ENST00000578297 HCFC1R1Q9NWW0 138 aa24.77■■□□□ 1.56
LIMD2-204ENST00000578297 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.77■■□□□ 1.56
LIMD2-204ENST00000578297 YIPF1Q9Y548 306 aa24.77■■□□□ 1.56
LIMD2-204ENST00000578297 DOCK6Q96HP0 2047 aa24.77■■□□□ 1.56
LIMD2-204ENST00000578297 TACC1O75410 805 aa24.76■■□□□ 1.55
LIMD2-204ENST00000578297 TRIM49P0CI25 452 aa24.76■■□□□ 1.55
LIMD2-204ENST00000578297 TRIM49CP0CI26 452 aa24.76■■□□□ 1.55
LIMD2-204ENST00000578297 PTPN2P17706 415 aa24.76■■□□□ 1.55
LIMD2-204ENST00000578297 WARSP23381 471 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms