RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 KIAA1257Q9ULG3 409 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 INPP5FQ9Y2H2 1132 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 CAPN6Q9Y6Q1 641 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 CLTBP09497 229 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 CD19P15391 556 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 PAX3P23760 479 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 NSFP46459 744 aaKnown RBP19.76■□□□□ 0.75
PRKCA-203ENST00000578063 NDST1P52848 882 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 TUSC3Q13454 348 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 SOWAHAQ2M3V2 549 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 DPH6Q7L8W6 267 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 LIMS2Q7Z4I7 341 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 NECAB2Q7Z6G3 386 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 UNC93AQ86WB7 457 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 TOP6BLQ8N6T0 577 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 APPL2Q8NEU8 664 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 URGCPQ8TCY9 931 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 TRIM11Q96F44 468 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 SCLYQ96I15 445 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 CALR3Q96L12 384 aaKnown RBP19.76■□□□□ 0.75
PRKCA-203ENST00000578063 TWNKQ96RR1 684 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 NAPGQ99747 312 aaPredicted RBP19.76■□□□□ 0.75
PRKCA-203ENST00000578063 MRPL45Q9BRJ2 306 aaKnown RBP19.76■□□□□ 0.75
PRKCA-203ENST00000578063 DNAI2Q9GZS0 605 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 THAP2Q9H0W7 228 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 TMEM39AQ9NV64 488 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 CEP83Q9Y592 693 aa19.76■□□□□ 0.75
PRKCA-203ENST00000578063 SCN1AP35498 2009 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 ENPP3O14638 875 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 BUB1O43683 1085 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 HUS1O60921 280 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 POMCP01189 267 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 FAM163BP0C2L3 166 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 VDRP11473 427 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 CCL23P55773 120 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 NOMO3P69849 1222 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 GPC5P78333 572 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 RHOT2Q8IXI1 618 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 TFAP2BQ92481 460 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 CYFIP2Q96F07 1278 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 RNF216Q9NWF9 866 aaPredicted RBP19.75■□□□□ 0.75
PRKCA-203ENST00000578063 GTF3C4Q9UKN8 822 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 PCDHGC5Q9Y5F6 944 aa19.75■□□□□ 0.75
PRKCA-203ENST00000578063 MYBL1P10243 752 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 CYP2C18P33260 490 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 RFC2P35250 354 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 CLCNKBP51801 687 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 TCEAL1Q15170 157 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 UPP1Q16831 310 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 NAA35Q5VZE5 725 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 ZSWIM1Q9BR11 485 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 ZNF518BQ9C0D4 1074 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 PRDM10Q9NQV6 1147 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 KANSL3Q9P2N6 904 aa19.74■□□□□ 0.75
PRKCA-203ENST00000578063 CASTOR2A6NHX0 329 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 CDH5P33151 784 aaPredicted RBP19.73■□□□□ 0.75
PRKCA-203ENST00000578063 NOP2P46087 812 aaKnown RBP19.73■□□□□ 0.75
PRKCA-203ENST00000578063 STILQ15468 1287 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 LRRC26Q2I0M4 334 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 SGO2Q562F6 1265 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 NOMO2Q5JPE7 1267 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 CLLU1OSQ5K130 101 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 PASD1Q8IV76 773 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 ADGRF2Q8IZF7 708 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 TMEM35BQ8NCS4 154 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 ZNF653Q96CK0 615 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 HEXIM2Q96MH2 286 aaKnown RBP19.73■□□□□ 0.75
PRKCA-203ENST00000578063 MCOLN1Q9GZU1 580 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 L1RE1Q9UN81 338 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 PCDHB7Q9Y5E2 793 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 CFHP08603 1231 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 AARSP49588 968 aaKnown RBP eCLIP19.73■□□□□ 0.753e-7■■■■■ 72.1
PRKCA-203ENST00000578063 ORC1Q13415 861 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 PHF13Q86YI8 300 aaPredicted RBP19.73■□□□□ 0.75
PRKCA-203ENST00000578063 OR6B3Q8NGW1 331 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 KBTBD7Q8WVZ9 684 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 CPA5Q8WXQ8 436 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 RSPH1Q8WYR4 309 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 ARHGEF26Q96DR7 871 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 VCPIP1Q96JH7 1222 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 LHX5Q9H2C1 402 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 SNX25Q9H3E2 840 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 JRKLQ9Y4A0 524 aa19.73■□□□□ 0.75
PRKCA-203ENST00000578063 CYB561D2O14569 222 aa19.72■□□□□ 0.75
PRKCA-203ENST00000578063 HOXA2O43364 376 aa19.72■□□□□ 0.75
PRKCA-203ENST00000578063 CYP1A2P05177 515 aa19.72■□□□□ 0.75
PRKCA-203ENST00000578063 WARSP23381 471 aaKnown RBP19.72■□□□□ 0.75
PRKCA-203ENST00000578063 HADHBP55084 474 aaKnown RBP19.72■□□□□ 0.75
PRKCA-203ENST00000578063 MON1BQ7L1V2 547 aa19.72■□□□□ 0.75
PRKCA-203ENST00000578063 MCOLN2Q8IZK6 566 aa19.72■□□□□ 0.75
PRKCA-203ENST00000578063 SLC35G2Q8TBE7 412 aa19.72■□□□□ 0.75
PRKCA-203ENST00000578063 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.72■□□□□ 0.75
PRKCA-203ENST00000578063 A8MXQ7 604 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 O00370 1275 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 URI1O94763 535 aaPredicted RBP19.71■□□□□ 0.75
PRKCA-203ENST00000578063 FGFR1P11362 822 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 GNL1P36915 607 aaPredicted RBP19.71■□□□□ 0.75
PRKCA-203ENST00000578063 C1QBPQ07021 282 aaKnown RBP19.71■□□□□ 0.75
PRKCA-203ENST00000578063 CNGA2Q16280 664 aa19.71■□□□□ 0.75
PRKCA-203ENST00000578063 ABI1Q8IZP0 508 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms