RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 A0A087WWV3 80 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TTC36A6NLP5 189 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 GSTA4O15217 222 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ZRANB2O95218 330 aaKnown RBP eCLIP3.08□□□□□ -1.922e-6■□□□□ 11.2
SMCHD1-203ENST00000577880 ANP32DO95626 131 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TTC4O95801 387 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TROVE2P10155 538 aaKnown RBP eCLIP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 HDCP19113 662 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 MUTP22033 750 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CXCR2P25025 360 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PTPN3P26045 913 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 DHPSP49366 369 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PRKCZQ05513 592 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SRSF11Q05519 484 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SCRN1Q12765 414 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CRHR2Q13324 411 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 NNTQ13423 1086 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PSMD5Q16401 504 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 KYNUQ16719 465 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PLA2G4FQ68DD2 849 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.08□□□□□ -1.926e-6■□□□□ 10
SMCHD1-203ENST00000577880 RHOT2Q8IXI1 618 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CAMKK1Q8N5S9 505 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TDRD5Q8NAT2 981 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ZSCAN1Q8NBB4 408 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 B3GALNT2Q8NCR0 500 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 GMCL1P1Q8NEA9 526 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PDZD8Q8NEN9 1154 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 MAGOHBQ96A72 148 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SAMD11Q96NU1 681 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SH2D3AQ9BRG2 576 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CARD6Q9BX69 1037 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CELF4Q9BZC1 486 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 VCXQ9H320 206 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PXMP2Q9NR77 195 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SAE1Q9UBE0 346 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 KIAA1257Q9ULG3 409 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TNFSF13BQ9Y275 285 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PCDHA5Q9Y5H7 936 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 MAPK13O15264 365 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 LAMTOR5O43504 91 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 MTA2O94776 668 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 NFATC1O95644 943 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ASGR1P07306 291 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CYP11B2P19099 503 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CDC27P30260 824 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TM4SF1P30408 202 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 HADHAP40939 763 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 NAMPTP43490 491 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 RGS7P49802 495 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SNRPFP62306 86 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 POLR2LP62875 67 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 USP4Q13107 963 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CAMK2GQ13555 558 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TP53BP2Q13625 1128 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 LRRC32Q14392 662 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 STAT4Q14765 748 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 LY6KQ17RY6 165 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 RABL6Q3YEC7 729 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 RARS2Q5T160 578 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 C10orf76Q5T2E6 689 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 KHDRBS2Q5VWX1 349 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PKN3Q6P5Z2 889 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 MPZL3Q6UWV2 235 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PRPF39Q86UA1 669 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CACUL1Q86Y37 369 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PASD1Q8IV76 773 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TRIM42Q8IWZ5 723 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SYTL1Q8IYJ3 562 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ZNF513Q8N8E2 541 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SYTL5Q8TDW5 730 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SPIRE2Q8WWL2 714 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 STMN2Q93045 179 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 FAF2Q96CS3 445 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 EEF2KMTQ96G04 330 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 DNAJC1Q96KC8 554 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 NDEL1Q9GZM8 345 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PDGFDQ9GZP0 370 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 JMJD4Q9H9V9 463 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 POLD4Q9HCU8 107 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CACNA2D2Q9NY47 1150 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 KIAA1468Q9P260 1216 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 IP6K2Q9UHH9 426 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SFMBT1Q9UHJ3 866 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 HEMK1Q9Y5R4 338 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 NFASCO94856 1347 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 NRXN1Q9ULB1 1477 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 STRCP1A6NGW2 1772 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 BRWD3Q6RI45 1802 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 EEF2KO00418 725 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 FBXO21O94952 628 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 LGALS2P05162 132 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 APOA4P06727 396 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ACRP10323 421 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 HPGDP15428 266 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PDGFRAP16234 1089 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PSMA3P25788 255 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 MTHFRP42898 656 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 AARSP49588 968 aaKnown RBP eCLIP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms