RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 TCHHQ07283 1943 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 ANO9A1A5B4 782 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 H3BQV1 296 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 K7ESF4 209 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 PIRO00625 290 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 TRAK2O60296 914 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 FAM13AO94988 1023 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 CYP3A5P20815 502 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 ADSSP30520 456 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 CASP5P51878 434 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 PUM1Q14671 1186 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■□□□□ 8.9
PRPF8-215ENST00000576958 RABEP1Q15276 862 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 SF3A1Q15459 793 aaKnown RBP13.04□□□□□ -0.32
PRPF8-215ENST00000576958 CCDC6Q16204 474 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 WSCD1Q658N2 575 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 TRIM68Q6AZZ1 485 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 PRR23BQ6ZRT6 265 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 DYMQ7RTS9 669 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 USP37Q86T82 979 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 TMEM150AQ86TG1 271 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 SFR1Q86XK3 245 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 IRF7Q92985 503 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 BORCS6Q96GS4 357 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 ATXN3LQ9H3M9 355 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 USP18Q9UMW8 372 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
PRPF8-215ENST00000576958 OR6C75A6NL08 312 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 SPECC1L-ADORA2AF8WAN1 911 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 EXTL3O43909 919 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 GDF9O60383 454 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 TYMPP19971 482 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 EPHB3P54753 998 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 FCHO2Q0JRZ9 810 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 TMEM132DQ14C87 1099 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 MGAT5BQ3V5L5 792 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 DEPDC1BQ8WUY9 529 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 PSMG2Q969U7 264 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 SAAL1Q96ER3 474 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 NELL2Q99435 816 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 PYM1Q9BRP8 204 aaKnown RBP13.03□□□□□ -0.32
PRPF8-215ENST00000576958 SLC46A2Q9BY10 475 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 ZCWPW1Q9H0M4 648 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 LARSQ9P2J5 1176 aaKnown RBP13.03□□□□□ -0.32
PRPF8-215ENST00000576958 ODF2LQ9ULJ1 636 aa13.03□□□□□ -0.32
PRPF8-215ENST00000576958 MRPS17Q9Y2R5 130 aaKnown RBP13.03□□□□□ -0.32
PRPF8-215ENST00000576958 ZFHX4Q86UP3 3567 aa13.02□□□□□ -0.32
PRPF8-215ENST00000576958 EPG5Q9HCE0 2579 aa13.02□□□□□ -0.32
PRPF8-215ENST00000576958 A0A087X0B3 334 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 GOLGA8IPA6NC78 632 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 GOLGA8JA6NMD2 632 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 MAN2B1O00754 1011 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 CYB561D2O14569 222 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 NCAM2O15394 837 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 KRT18P05783 430 aaKnown RBP13.02□□□□□ -0.33
PRPF8-215ENST00000576958 ODC1P11926 461 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 ACAT1P24752 427 aaKnown RBP13.02□□□□□ -0.33
PRPF8-215ENST00000576958 CTHP32929 405 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 UBA7P41226 1012 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 MAGEA9P43362 315 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 ALDH1A3P47895 512 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 KPNA1P52294 538 aaPredicted RBP13.02□□□□□ -0.33
PRPF8-215ENST00000576958 GTF2BQ00403 316 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 ARL6IP4Q66PJ3 421 aaKnown RBP13.02□□□□□ -0.33
PRPF8-215ENST00000576958 ADALQ6DHV7 355 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 OSTM1Q86WC4 334 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 GLIS3Q8NEA6 775 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 FAM200AQ8TCP9 573 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 CNTNAP3BQ96NU0 1288 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 CNTNAP3Q9BZ76 1288 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 FBRSL1Q9HCM7 1045 aaKnown RBP13.02□□□□□ -0.33
PRPF8-215ENST00000576958 TRPV5Q9NQA5 729 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 ABI2Q9NYB9 513 aaPredicted RBP13.02□□□□□ -0.33
PRPF8-215ENST00000576958 KCND2Q9NZV8 630 aa13.02□□□□□ -0.33
PRPF8-215ENST00000576958 DENND4CQ5VZ89 1909 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 MYBPHLA2RUH7 354 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 MYMKA6NI61 221 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 CHADO15335 359 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 TADA3O75528 432 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 ARSAP15289 507 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 CXCL12P48061 93 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
PRPF8-215ENST00000576958 MYBPC2Q14324 1141 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 PTPAQ15257 358 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 LARP1BQ659C4 914 aaKnown RBP13.01□□□□□ -0.33
PRPF8-215ENST00000576958 LMBRD2Q68DH5 695 aaPredicted RBP13.01□□□□□ -0.33
PRPF8-215ENST00000576958 YAF2Q8IY57 180 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 CSGALNACT1Q8TDX6 532 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 KCNN1Q92952 543 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 HPS3Q969F9 1004 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 CALML4Q96GE6 196 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 PI4K2AQ9BTU6 479 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 SMOC1Q9H4F8 434 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 HPS4Q9NQG7 708 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 RXFP3Q9NSD7 469 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 DPP3Q9NY33 737 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 SMC3Q9UQE7 1217 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 EML5Q05BV3 1969 aa13.01□□□□□ -0.33
PRPF8-215ENST00000576958 LAMA1P25391 3075 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms