RNA–Protein interactions for RNA: ENST00000576872.1

CAMTA2-216, Transcript of calmodulin binding transcription activator 2, human

TSL 2

Gene CAMTA2, Length 985 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA2-216	ENST00000576872	AP3M2	P53677	418 aa		18.82	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TDRD10	Q5VZ19	366 aa	Known RBP	18.82	■□□□□ 0.6
CAMTA2-216	ENST00000576872	GRASP	Q7Z6J2	395 aa	Predicted RBP	18.82	■□□□□ 0.6
CAMTA2-216	ENST00000576872	FAM186B	Q8IYM0	893 aa		18.82	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TMEM86A	Q8N2M4	240 aa		18.82	■□□□□ 0.6
CAMTA2-216	ENST00000576872	POLI	Q9UNA4	740 aa		18.82	■□□□□ 0.6
CAMTA2-216	ENST00000576872	MTMR11	A4FU01	709 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	LRG1	P02750	347 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	CD44	P16070	742 aa	Known RBP	18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	BMP6	P22004	513 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PSMC2	P35998	433 aa	Known RBP	18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PMS1	P54277	932 aa	Known RBP	18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	NTHL1	P78549	312 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	BIRC3	Q13489	604 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TRPC3	Q13507	836 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	MORC3	Q14149	939 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	SOWAHA	Q2M3V2	549 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	C1orf220	Q5T0J3	134 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	OTOP3	Q7RTS5	596 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	LIMS2	Q7Z4I7	341 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	OSTM1	Q86WC4	334 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ADGRF2	Q8IZF7	708 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	SPATA18	Q8TC71	538 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TSG101	Q99816	390 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	CRISPLD1	Q9H336	500 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	MUTYH	Q9UIF7	546 aa		18.81	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PI4K2B	G5E9Z4	385 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	BIN1	O00499	593 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	CETN3	O15182	167 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	N4BP1	O75113	896 aa	Known RBP	18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PHACTR2	O75167	634 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	STAU1	O95793	577 aa	Known RBP	18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	VAMP7	P51809	220 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	MYL6	P60660	151 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	DUSP4	Q13115	394 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	STIM1	Q13586	685 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	CAMK4	Q16566	473 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	SLC39A12	Q504Y0	691 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ANKRD40	Q6AI12	368 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	INTS8	Q75QN2	995 aa	Known RBP	18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	DPH6	Q7L8W6	267 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	LRRTM3	Q86VH5	581 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ZC3H3	Q8IXZ2	948 aa	Known RBP	18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ZDHHC14	Q8IZN3	488 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ATAD1	Q8NBU5	361 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ACSF2	Q96CM8	615 aa	Predicted RBP	18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	EEF2KMT	Q96G04	330 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	MKNK1	Q9BUB5	465 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	XYLT2	Q9H1B5	865 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	EPHX3	Q9H6B9	360 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	HCFC1R1	Q9NWW0	138 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	DDX43	Q9NXZ2	648 aa	Known RBP	18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	DNMT3B	Q9UBC3	853 aa	Known RBP	18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	YIPF1	Q9Y548	306 aa		18.8	■□□□□ 0.6
CAMTA2-216	ENST00000576872	NOTCH4	Q99466	2003 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	DOCK8	Q8NF50	2099 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TRIM49B	A6NDI0	452 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	GABRD	O14764	452 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PSMA7	O14818	248 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	IKBKB	O14920	756 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	DCX	O43602	365 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	VNN1	O95497	513 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TRIM49	P0CI25	452 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TRIM49C	P0CI26	452 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	KRT13	P13646	458 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	FSHR	P23945	695 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	CCNE1	P24864	410 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ATIC	P31939	592 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PPP1R2	P41236	205 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	MYL7	Q01449	175 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	LRRC63	Q05C16	580 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ENPEP	Q07075	957 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TWF1	Q12792	350 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	NCOA4	Q13772	614 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ZACN	Q401N2	412 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	GET4	Q7L5D6	327 aa	Predicted RBP	18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PLCD3	Q8N3E9	789 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TTC9B	Q8N6N2	239 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	KBTBD7	Q8WVZ9	684 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	MYADM	Q96S97	322 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ACBD6	Q9BR61	282 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	LMBRD1	Q9NUN5	540 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	KIAA1468	Q9P260	1216 aa		18.79	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PPP1R3G	B7ZBB8	358 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	HCRT	O43612	131 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	EPB41	P11171	864 aa	Known RBP	18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	ACAT1	P24752	427 aa	Known RBP	18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	GBP2	P32456	591 aa	Predicted RBP	18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	LHX1	P48742	406 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	MCCD1	P59942	119 aa	Predicted RBP	18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	FKBP3	Q00688	224 aa	Known RBP	18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	TSPY1	Q01534	308 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	WDR72	Q3MJ13	1102 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	PABPC1L	Q4VXU2	614 aa	Known RBP	18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	SV2A	Q7L0J3	742 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	DCP1B	Q8IZD4	617 aa	Known RBP	18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	SYAP1	Q96A49	352 aa	Predicted RBP	18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	GBP4	Q96PP9	640 aa		18.78	■□□□□ 0.6
CAMTA2-216	ENST00000576872	MMS19	Q96T76	1030 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms