RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 NR2F2P24468 414 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 AP3M2P53677 418 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 DUSP4Q13115 394 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 SNW1Q13573 536 aaKnown RBP16.39■□□□□ 0.21
SMG6-220ENST00000576218 STIM1Q13586 685 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 VEPH1Q14D04 833 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 MGAT5BQ3V5L5 792 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 CYP4A22Q5TCH4 519 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 SLC9A9Q8IVB4 645 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 PDCL2Q8N4E4 241 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 TOP6BLQ8N6T0 577 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 ENGASEQ8NFI3 743 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 OR10T2Q8NGX3 314 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 ING5Q8WYH8 240 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 GSDMAQ96QA5 445 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 MYADMQ96S97 322 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 TMEM209Q96SK2 561 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 GTPBP4Q9BZE4 634 aaKnown RBP16.39■□□□□ 0.21
SMG6-220ENST00000576218 ASAH2Q9NR71 780 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 DDX43Q9NXZ2 648 aaKnown RBP16.39■□□□□ 0.21
SMG6-220ENST00000576218 ABI2Q9NYB9 513 aaPredicted RBP16.39■□□□□ 0.21
SMG6-220ENST00000576218 DNMT3BQ9UBC3 853 aaKnown RBP16.39■□□□□ 0.21
SMG6-220ENST00000576218 SIX4Q9UIU6 781 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 L1RE1Q9UN81 338 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 DENND4AQ7Z401 1863 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 MUC3AQ02505 3323 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 ZNF197O14709 1029 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 GPR37L1O60883 481 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 MYL4P12829 197 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 LHX1P48742 406 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 CASP4P49662 377 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 CDR1P51861 262 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 SMARCB1Q12824 385 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 UBALD2Q8IYN6 164 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 ATAD1Q8NBU5 361 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 ERCC4Q92889 916 aaPredicted RBP16.38■□□□□ 0.21
SMG6-220ENST00000576218 MFSD14AQ96MC6 490 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 ZCWPW1Q9H0M4 648 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 GDAP2Q9NXN4 497 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 IGSF9Q9P2J2 1179 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 CDH7Q9ULB5 785 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 TRAF3IP3Q9Y228 551 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 SLC27A5Q9Y2P5 690 aa16.38■□□□□ 0.21
SMG6-220ENST00000576218 ZFP37Q9Y6Q3 630 aaPredicted RBP16.38■□□□□ 0.21
SMG6-220ENST00000576218 PRR33A8MZF0 331 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 N4BP1O75113 896 aaKnown RBP16.37■□□□□ 0.21
SMG6-220ENST00000576218 PAPLNO95428 1278 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 LAMP2P13473 410 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 ACAT1P24752 427 aaKnown RBP16.37■□□□□ 0.21
SMG6-220ENST00000576218 PCSK1P29120 753 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 TUFMP49411 452 aaKnown RBP16.37■□□□□ 0.21
SMG6-220ENST00000576218 SIGLEC14Q08ET2 396 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 ADAM9Q13443 819 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 TDGQ13569 410 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 ZNF658Q5TYW1 1059 aaPredicted RBP16.37■□□□□ 0.21
SMG6-220ENST00000576218 TRIM67Q6ZTA4 783 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 ITIH5Q86UX2 942 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 FAM186BQ8IYM0 893 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 ITFG1Q8TB96 612 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 C2orf15Q8WU43 125 aaKnown RBP16.37■□□□□ 0.21
SMG6-220ENST00000576218 SYAP1Q96A49 352 aaPredicted RBP16.37■□□□□ 0.21
SMG6-220ENST00000576218 LRFN3Q9BTN0 628 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 SNX25Q9H3E2 840 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 SLITRK6Q9H5Y7 841 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 KCNK12Q9HB15 430 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 EPS15L1Q9UBC2 864 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 FBXL21Q9UKT6 434 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 PCDHB5Q9Y5E4 795 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 PCDHA5Q9Y5H7 936 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 TSC2P49815 1807 aa16.37■□□□□ 0.21
SMG6-220ENST00000576218 TMEM221A6NGB7 291 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 LRRIQ3A6PVS8 624 aaPredicted RBP16.36■□□□□ 0.21
SMG6-220ENST00000576218 M0R296 226 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 GADD45BO75293 160 aaPredicted RBP16.36■□□□□ 0.21
SMG6-220ENST00000576218 RFX1P22670 979 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 PSMC2P35998 433 aaKnown RBP16.36■□□□□ 0.21
SMG6-220ENST00000576218 NFE2Q16621 373 aaPredicted RBP16.36■□□□□ 0.21
SMG6-220ENST00000576218 ZNF699Q32M78 642 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 WDR72Q3MJ13 1102 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 CENPPQ6IPU0 288 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 INTS8Q75QN2 995 aaKnown RBP16.36■□□□□ 0.21
SMG6-220ENST00000576218 MTSS1LQ765P7 747 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 LEMD2Q8NC56 503 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 SPATA18Q8TC71 538 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 SPPL2BQ8TCT7 592 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 PARD3BQ8TEW8 1205 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 FGF13Q92913 245 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 BORCS6Q96GS4 357 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 ACBD6Q9BR61 282 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 MMRN2Q9H8L6 949 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 DMAC2Q9NW81 257 aa16.36■□□□□ 0.21
SMG6-220ENST00000576218 NXF1Q9UBU9 619 aaKnown RBP16.36■□□□□ 0.21
SMG6-220ENST00000576218 PSMA7O14818 248 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 CETN3O15182 167 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 SOAT2O75908 522 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
SMG6-220ENST00000576218 ATICP31939 592 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 PIK3CAP42336 1068 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 VAMP7P51809 220 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 MYL6P60660 151 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms