RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 TMEM132DQ14C87 1099 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 PCBP1Q15365 356 aaKnown RBP eCLIP19.87■□□□□ 0.77
SPNS3-204ENST00000575194 CYP1B1Q16678 543 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 MARCH8Q5T0T0 291 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 CFAP58Q5T655 872 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 JADE1Q6IE81 842 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 SCARA5Q6ZMJ2 495 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 CPB2Q96IY4 423 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 PPP1R16BQ96T49 567 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 VRTNQ9H8Y1 702 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 PCYOX1Q9UHG3 505 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 PAEPP09466 180 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 EIF4BP23588 611 aaKnown RBP19.86■□□□□ 0.77
SPNS3-204ENST00000575194 CDH5P33151 784 aaPredicted RBP19.86■□□□□ 0.77
SPNS3-204ENST00000575194 GUCY2FP51841 1108 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 GJA9P57773 515 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 MAMLD1Q13495 774 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 ZNF771Q7L3S4 317 aaPredicted RBP19.86■□□□□ 0.77
SPNS3-204ENST00000575194 ADAT2Q7Z6V5 191 aaKnown RBP19.86■□□□□ 0.77
SPNS3-204ENST00000575194 KIAA0319LQ8IZA0 1049 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 TTC39CQ8N584 583 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 C1orf127Q8N9H9 656 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 C12orf50Q8NA57 414 aaPredicted RBP19.86■□□□□ 0.77
SPNS3-204ENST00000575194 MAGOHBQ96A72 148 aaKnown RBP19.86■□□□□ 0.77
SPNS3-204ENST00000575194 ACAP3Q96P50 834 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 UPF3AQ9H1J1 476 aaKnown RBP19.86■□□□□ 0.77
SPNS3-204ENST00000575194 CYP3A43Q9HB55 503 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 PSD3Q9NYI0 1048 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 IP6K2Q9UHH9 426 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 ITGA11Q9UKX5 1188 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 C2CD2Q9Y426 696 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 NRCAMQ92823 1304 aa19.86■□□□□ 0.77
SPNS3-204ENST00000575194 PODXLO00592 558 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 F2P00734 622 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 CFHP08603 1231 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 FAM153BP0C7A2 387 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 BRD2P25440 801 aaKnown RBP19.85■□□□□ 0.77
SPNS3-204ENST00000575194 FNTAP49354 379 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 IRX5P78411 483 aaPredicted RBP19.85■□□□□ 0.77
SPNS3-204ENST00000575194 MTMR3Q13615 1198 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 FAM153CQ494X1 144 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 RHOT1Q8IXI2 618 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 TMEM192Q8IY95 271 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 TSEN2Q8NCE0 465 aaKnown RBP19.85■□□□□ 0.77
SPNS3-204ENST00000575194 FEZF2Q8TBJ5 459 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 ERP44Q9BS26 406 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 GCOM2Q9BZD3 368 aaPredicted RBP19.85■□□□□ 0.77
SPNS3-204ENST00000575194 AP5M1Q9H0R1 490 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 ERVK-5Q9HDB9 667 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 HMX1Q9NP08 348 aaPredicted RBP19.85■□□□□ 0.77
SPNS3-204ENST00000575194 NXF1Q9UBU9 619 aaKnown RBP19.85■□□□□ 0.77
SPNS3-204ENST00000575194 FAM153AQ9UHL3 310 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 SIX4Q9UIU6 781 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 ADAM21Q9UKJ8 722 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 STRIP2Q9ULQ0 834 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 A0A1B0GUA9 196 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 AGPSO00116 658 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 WEE2P0C1S8 567 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 RARBP10826 455 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 ECHS1P30084 290 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 GRM5P41594 1212 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 JAMLQ86YT9 394 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 PRELID2Q8N945 189 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 SH3GL2Q99962 352 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 CELF4Q9BZC1 486 aaKnown RBP19.85■□□□□ 0.77
SPNS3-204ENST00000575194 DDX20Q9UHI6 824 aaKnown RBP19.85■□□□□ 0.77
SPNS3-204ENST00000575194 NR2E1Q9Y466 385 aa19.85■□□□□ 0.77
SPNS3-204ENST00000575194 TLR3O15455 904 aaKnown RBP19.84■□□□□ 0.77
SPNS3-204ENST00000575194 DAPK3O43293 454 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 STAU1O95793 577 aaKnown RBP19.84■□□□□ 0.77
SPNS3-204ENST00000575194 ITGB3P05106 788 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 CPT1AP50416 773 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 DRG2P55039 364 aaKnown RBP19.84■□□□□ 0.77
SPNS3-204ENST00000575194 PKN2Q16513 984 aaKnown RBP19.84■□□□□ 0.77
SPNS3-204ENST00000575194 LHX8Q68G74 356 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 AADACL2Q6P093 401 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 DNAJC24Q6P3W2 148 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 FBXO46Q6PJ61 603 aaPredicted RBP19.84■□□□□ 0.77
SPNS3-204ENST00000575194 C1orf131Q8NDD1 294 aaKnown RBP19.84■□□□□ 0.77
SPNS3-204ENST00000575194 PKNOX2Q96KN3 472 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 LHX5Q9H2C1 402 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 PARP2Q9UGN5 583 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 POLIQ9UNA4 740 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 DERAQ9Y315 318 aa19.84■□□□□ 0.77
SPNS3-204ENST00000575194 SMIM35A0A1B0GVV1 85 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 FSCN2O14926 492 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 ADAMTS4O75173 837 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 CSDE1O75534 798 aaKnown RBP19.83■□□□□ 0.77
SPNS3-204ENST00000575194 SMIM10L2AP0DMW4 78 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 SMIM10L2BP0DMW5 78 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 POLR2BP30876 1174 aaKnown RBP19.83■□□□□ 0.77
SPNS3-204ENST00000575194 CETN2P41208 172 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 FSCN1Q16658 493 aaKnown RBP19.83■□□□□ 0.77
SPNS3-204ENST00000575194 SLC10A6Q3KNW5 377 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 WDR72Q3MJ13 1102 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 DUPD1Q68J44 220 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 SCARA3Q6AZY7 606 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 CPNE8Q86YQ8 564 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 TRIM51Q9BSJ1 452 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 FAM129AQ9BZQ8 928 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms