RNA–Protein interactions for RNA: ENST00000574691.1

NUBP1-208, Transcript of nucleotide binding protein 1, humanhuman

TSL 5

Gene NUBP1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-208ENST00000574691 CCDC70Q6NSX1 233 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 WDR93Q6P2C0 686 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 MRPL10Q7Z7H8 261 aaKnown RBP12.71□□□□□ -0.37
NUBP1-208ENST00000574691 PASD1Q8IV76 773 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 HACE1Q8IYU2 909 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 UBL4BQ8N7F7 174 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 USP38Q8NB14 1042 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 SLC43A3Q8NBI5 491 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 RUBCNQ92622 972 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 CD101Q93033 1021 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 C18orf25Q96B23 403 aaPredicted RBP12.71□□□□□ -0.37
NUBP1-208ENST00000574691 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.71□□□□□ -0.37
NUBP1-208ENST00000574691 APOL6Q9BWW8 343 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 ERVK-5Q9HDB9 667 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 PARVAQ9NVD7 372 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 LCMT1Q9UIC8 334 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 CEP83Q9Y592 693 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 SCINQ9Y6U3 715 aa12.71□□□□□ -0.37
NUBP1-208ENST00000574691 CITO14578 2027 aa12.71□□□□□ -0.38
NUBP1-208ENST00000574691 CCDC66A2RUB6 948 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 CCDC151A5D8V7 595 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 MYO1FO00160 1098 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 ZNF623O75123 536 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 INHAP05111 366 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 RHOXF2BP0C7M4 288 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 CD19P15391 556 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 LRPAP1P30533 357 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 GRK4P32298 578 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 THPOP40225 353 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 PEX5P50542 639 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 DNA2P51530 1060 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 CLCN6P51797 869 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 C2orf54Q08AI8 447 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 MAMLD1Q13495 774 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 STILQ15468 1287 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 FBXO47Q5MNV8 452 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 DENND1BQ6P3S1 775 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 MMS22LQ6ZRQ5 1243 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 LIMS2Q7Z4I7 341 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 UNC93AQ86WB7 457 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 ERICH1Q86X53 443 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 ARRDC4Q8NCT1 418 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 ZNF296Q8WUU4 475 aaPredicted RBP12.7□□□□□ -0.38
NUBP1-208ENST00000574691 HNRNPLLQ8WVV9 542 aaKnown RBP12.7□□□□□ -0.38
NUBP1-208ENST00000574691 RHOXF2Q9BQY4 288 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 C11orf70Q9BRQ4 267 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 NT5C1AQ9BXI3 368 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 SEZ6LQ9BYH1 1024 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 FAM105AQ9NUU6 356 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 GDAP2Q9NXN4 497 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 EHD2Q9NZN4 543 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 KLK14Q9P0G3 267 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 TUBGCP4Q9UGJ1 667 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 CHORDC1Q9UHD1 332 aaPredicted RBP12.7□□□□□ -0.38
NUBP1-208ENST00000574691 PCDHA3Q9Y5H8 950 aa12.7□□□□□ -0.38
NUBP1-208ENST00000574691 TCRBV5S1A1TA0A578 114 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 FAM170AA1A519 330 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 TMEM110-MUSTN1A8MSY1 372 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 CCDC188H7C350 402 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 PGRMC1O00264 195 aaKnown RBP12.69□□□□□ -0.38
NUBP1-208ENST00000574691 ATP8B1O43520 1251 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 PROSCO94903 275 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
NUBP1-208ENST00000574691 ITGA4P13612 1032 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 CTNNA1P35221 906 aaKnown RBP12.69□□□□□ -0.38
NUBP1-208ENST00000574691 NDST1P52848 882 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 TAP1Q03518 808 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 NFX1Q12986 1120 aaKnown RBP12.69□□□□□ -0.38
NUBP1-208ENST00000574691 DSC3Q14574 896 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 SGO2Q562F6 1265 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 FEZF2Q8TBJ5 459 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 HEXIM2Q96MH2 286 aaKnown RBP12.69□□□□□ -0.38
NUBP1-208ENST00000574691 ZNF560Q96MR9 790 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 GLT1D1Q96MS3 346 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 PPP1R10Q96QC0 940 aaKnown RBP12.69□□□□□ -0.38
NUBP1-208ENST00000574691 TWNKQ96RR1 684 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 PNKPQ96T60 521 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 NAP1L3Q99457 506 aaPredicted RBP12.69□□□□□ -0.38
NUBP1-208ENST00000574691 AGO3Q9H9G7 860 aaKnown RBP12.69□□□□□ -0.38
NUBP1-208ENST00000574691 RBM12Q9NTZ6 932 aaKnown RBP12.69□□□□□ -0.38
NUBP1-208ENST00000574691 SLC38A7Q9NVC3 462 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 SMARCAL1Q9NZC9 954 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 ANAPC7Q9UJX3 599 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 STRIP2Q9ULQ0 834 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
NUBP1-208ENST00000574691 RALGAPA2Q2PPJ7 1873 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 TMEM191CA6NGB0 347 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 O00370 1275 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 PPEF2O14830 753 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 SPOPO43791 374 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 ERLIN1O75477 346 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 MICAL2O94851 1124 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 CTSHP09668 335 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 SSTR3P32745 418 aaPredicted RBP12.68□□□□□ -0.38
NUBP1-208ENST00000574691 MAN1A1P33908 653 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 TAF6P49848 677 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 RAB27AP51159 221 aa12.68□□□□□ -0.38
NUBP1-208ENST00000574691 GSCP56915 257 aaPredicted RBP12.68□□□□□ -0.38
NUBP1-208ENST00000574691 ZNF268Q14587 947 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms