RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 ZNF560Q96MR9 790 aa21.23■□□□□ 0.99
SCARF1-208ENST00000574545 KIAA1586Q9HCI6 787 aa21.23■□□□□ 0.99
SCARF1-208ENST00000574545 ITGA11Q9UKX5 1188 aa21.23■□□□□ 0.99
SCARF1-208ENST00000574545 SLC27A5Q9Y2P5 690 aa21.23■□□□□ 0.99
SCARF1-208ENST00000574545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.22■□□□□ 0.99
SCARF1-208ENST00000574545 ZNF197O14709 1029 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 CLIC2O15247 247 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 GPC5P78333 572 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 STK4Q13043 487 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 SURF1Q15526 300 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 LMBRD2Q68DH5 695 aaPredicted RBP21.22■□□□□ 0.99
SCARF1-208ENST00000574545 IQCEQ6IPM2 695 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 PDZD4Q76G19 769 aaPredicted RBP21.22■□□□□ 0.99
SCARF1-208ENST00000574545 METTL23Q86XA0 190 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 TMC8Q8IU68 726 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 NELFCDQ8IXH7 590 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 C12orf56Q8IXR9 622 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 SIX5Q8N196 739 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 ELMOD1Q8N336 334 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 CSGALNACT2Q8N6G5 542 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 TTC9BQ8N6N2 239 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 MTMR12Q9C0I1 747 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 GDAP2Q9NXN4 497 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 USP25Q9UHP3 1055 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 FBXL21Q9UKT6 434 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 L1RE1Q9UN81 338 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 MYO15AQ9UKN7 3530 aa21.22■□□□□ 0.99
SCARF1-208ENST00000574545 PI15O43692 258 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 ECI2O75521 394 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 AOC1P19801 751 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 RBP5P82980 135 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 CYP4A22Q5TCH4 519 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 LIMS2Q7Z4I7 341 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 THEM5Q8N1Q8 247 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 PDCL2Q8N4E4 241 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 LEMD2Q8NC56 503 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 KIAA0895Q8NCT3 520 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 NOC3LQ8WTT2 800 aaKnown RBP21.21■□□□□ 0.99
SCARF1-208ENST00000574545 PLA2G2FQ9BZM2 168 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 GZF1Q9H116 711 aaPredicted RBP21.21■□□□□ 0.99
SCARF1-208ENST00000574545 MFSD1Q9H3U5 465 aa21.21■□□□□ 0.99
SCARF1-208ENST00000574545 TMEM191BP0C7N4 346 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 FCARP24071 287 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 HOXD11P31277 338 aaPredicted RBP21.2■□□□□ 0.98
SCARF1-208ENST00000574545 NDUFA8P51970 172 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 PTPN5P54829 565 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 PLD1Q13393 1074 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 SNRNP35Q16560 246 aaKnown RBP21.2■□□□□ 0.98
SCARF1-208ENST00000574545 KNOP1Q1ED39 458 aaKnown RBP21.2■□□□□ 0.98
SCARF1-208ENST00000574545 DUOXA2Q1HG44 320 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 SLC39A12Q504Y0 691 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 TANGO2Q6ICL3 276 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 FLCNQ8NFG4 579 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 ANKRD36BP1Q96IX9 119 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 ZSWIM3Q96MP5 696 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 SCAND2PQ9GZW5 306 aaPredicted RBP21.2■□□□□ 0.98
SCARF1-208ENST00000574545 ASAH2Q9NR71 780 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 CGNQ9P2M7 1197 aaKnown RBP21.2■□□□□ 0.98
SCARF1-208ENST00000574545 ATP6V1DQ9Y5K8 247 aa21.2■□□□□ 0.98
SCARF1-208ENST00000574545 A0A1W2PQ27 194 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 A0A1W2PQ64 194 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 A0A1W2PQD8 194 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 GALR2O43603 387 aaPredicted RBP21.19■□□□□ 0.98
SCARF1-208ENST00000574545 SOAT2O75908 522 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 MYL1P05976 194 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 EPHB3P54753 998 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 SMARCB1Q12824 385 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 PSMD2Q13200 908 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 KMT5BQ4FZB7 885 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 WDR49Q8IV35 697 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 XXYLT1Q8NBI6 393 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 RDH13Q8NBN7 331 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 SHKBP1Q8TBC3 707 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 C2orf15Q8WU43 125 aaKnown RBP21.19■□□□□ 0.98
SCARF1-208ENST00000574545 TMEM174Q8WUU8 243 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 PSMG2Q969U7 264 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 ELSPBP1Q96BH3 223 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 KXD1Q9BQD3 176 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 TMLHEQ9NVH6 421 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 CA14Q9ULX7 337 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 ASB3Q9Y575 518 aa21.19■□□□□ 0.98
SCARF1-208ENST00000574545 GABRDO14764 452 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 KRT19P08727 400 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 MYL4P12829 197 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 GJA1P17302 382 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 SYKP43405 635 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 ALDH1A3P47895 512 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 TUFMP49411 452 aaKnown RBP21.18■□□□□ 0.98
SCARF1-208ENST00000574545 CYP2J2P51589 502 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 CYP24A1Q07973 514 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 PSMD6Q15008 389 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 FAM78AQ5JUQ0 283 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 PHLDB3Q6NSJ2 640 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 HS2ST1Q7LGA3 356 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 DNAJB7Q7Z6W7 309 aaPredicted RBP21.18■□□□□ 0.98
SCARF1-208ENST00000574545 OSTM1Q86WC4 334 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 TMEM86AQ8N2M4 240 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 TOP6BLQ8N6T0 577 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 SPATA18Q8TC71 538 aa21.18■□□□□ 0.98
SCARF1-208ENST00000574545 SPPL2BQ8TCT7 592 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms