RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 ASAH2Q9NR71 780 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 ARHGEF3Q9NR81 526 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 HSPBP1Q9NZL4 362 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 TGFB1I1O43294 461 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 SOAT2O75908 522 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 MICAL2O94851 1124 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 PNPLA4P41247 253 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 ALDH1A3P47895 512 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 EPHB3P54753 998 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 PLD1Q13393 1074 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 NELFCDQ8IXH7 590 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 CEP57L1Q8IYX8 460 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 SCFD1Q8WVM8 642 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 TBC1D17Q9HA65 648 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 SLC39A2Q9NP94 309 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 FAM86C1Q9NVL1 165 aa28.08■■■□□ 2.09
NPLOC4-215ENST00000574095 ZNF233A6NK53 670 aa28.07■■■□□ 2.08
NPLOC4-215ENST00000574095 ECI2O75521 394 aa28.07■■■□□ 2.08
NPLOC4-215ENST00000574095 KRT19P08727 400 aa28.07■■■□□ 2.08
NPLOC4-215ENST00000574095 EPHA5P54756 1037 aa28.07■■■□□ 2.08
NPLOC4-215ENST00000574095 CXorf38Q8TB03 319 aa28.07■■■□□ 2.08
NPLOC4-215ENST00000574095 LEO1Q8WVC0 666 aaPredicted RBP28.07■■■□□ 2.08
NPLOC4-215ENST00000574095 ATOH1Q92858 354 aaPredicted RBP28.07■■■□□ 2.08
NPLOC4-215ENST00000574095 ZSWIM3Q96MP5 696 aa28.07■■■□□ 2.08
NPLOC4-215ENST00000574095 MTMR12Q9C0I1 747 aa28.07■■■□□ 2.08
NPLOC4-215ENST00000574095 A0A1B0GVL5 298 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 PVALEFA0A1B0GWK0 134 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 CLIC2O15247 247 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 TMEM191BP0C7N4 346 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 MRE11P49959 708 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 BFSP1Q12934 665 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 SNW1Q13573 536 aaKnown RBP28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 FAM78AQ5JUQ0 283 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 LRRTM3Q86VH5 581 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 RDH13Q8NBN7 331 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 LEMD2Q8NC56 503 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 SPATA32Q96LK8 384 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 LRRC3Q9BY71 257 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 AGPAT3Q9NRZ7 376 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 INTS13Q9NVM9 706 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 SIX4Q9UIU6 781 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 ITGA11Q9UKX5 1188 aa28.06■■■□□ 2.08
NPLOC4-215ENST00000574095 SLFN14P0C7P3 912 aa28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 KRT85P78386 507 aa28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 RBP5P82980 135 aa28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 PTPRJQ12913 1337 aa28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 TEAD2Q15562 447 aa28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 TMC8Q8IU68 726 aa28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 OR5B17Q8NGF7 314 aa28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 SHKBP1Q8TBC3 707 aa28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 ELSPBP1Q96BH3 223 aa28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 ANKRD36BP1Q96IX9 119 aa28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 SEPT5Q99719 369 aaPredicted RBP28.05■■■□□ 2.08
NPLOC4-215ENST00000574095 UBE4BO95155 1302 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 ACTN4O43707 911 aaKnown RBP28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 PFKFB1P16118 471 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 CMA1P23946 247 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 FCARP24071 287 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 SURF1Q15526 300 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 MGAT5BQ3V5L5 792 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 PHLDB3Q6NSJ2 640 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 DNAJB7Q7Z6W7 309 aaPredicted RBP28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 PDCL2Q8N4E4 241 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 LRRC52Q8N7C0 313 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 PAGE5Q96GU1 130 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 ASB16Q96NS5 453 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 IRF2BPLQ9H1B7 796 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 KIAA1586Q9HCI6 787 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 ZFP14Q9HCL3 533 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 HSFX1Q9UBD0 423 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 L1RE1Q9UN81 338 aa28.04■■■□□ 2.08
NPLOC4-215ENST00000574095 COL4A3Q01955 1670 aa28.03■■■□□ 2.08
NPLOC4-215ENST00000574095 A0A1W2PRU2 124 aa28.03■■■□□ 2.08
NPLOC4-215ENST00000574095 CYP2J2P51589 502 aa28.03■■■□□ 2.08
NPLOC4-215ENST00000574095 SLC44A4Q53GD3 710 aa28.03■■■□□ 2.08
NPLOC4-215ENST00000574095 CCDC105Q8IYK2 499 aa28.03■■■□□ 2.08
NPLOC4-215ENST00000574095 FAM200AQ8TCP9 573 aa28.03■■■□□ 2.08
NPLOC4-215ENST00000574095 ZNF334Q9HCZ1 680 aaPredicted RBP28.03■■■□□ 2.08
NPLOC4-215ENST00000574095 ASB3Q9Y575 518 aa28.03■■■□□ 2.08
NPLOC4-215ENST00000574095 SNX9Q9Y5X1 595 aa28.03■■■□□ 2.08
NPLOC4-215ENST00000574095 KLRC4O43908 158 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 HUS1O60921 280 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 TNNC2P02585 160 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 TUFMP49411 452 aaKnown RBP28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 STARD6P59095 220 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 PFKPQ01813 784 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 SNRNP35Q16560 246 aaKnown RBP28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 DCP1BQ8IZD4 617 aaKnown RBP28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 DTWD2Q8NBA8 298 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 SMARCD2Q92925 531 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 PSMG2Q969U7 264 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 LPIN3Q9BQK8 851 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 FOXQ1Q9C009 403 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 TMLHEQ9NVH6 421 aa28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 R3HCC1Q9Y3T6 440 aaKnown RBP28.02■■■□□ 2.08
NPLOC4-215ENST00000574095 DCNP07585 359 aaKnown RBP28.01■■■□□ 2.07
NPLOC4-215ENST00000574095 GRM2Q14416 872 aa28.01■■■□□ 2.07
NPLOC4-215ENST00000574095 MLF2Q15773 248 aaPredicted RBP28.01■■■□□ 2.07
NPLOC4-215ENST00000574095 DUOXA2Q1HG44 320 aa28.01■■■□□ 2.07
NPLOC4-215ENST00000574095 BMT2Q1RMZ1 405 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms