RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ALOX15BO15296 676 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 RTP1P59025 263 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 PLCB3Q01970 1234 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 SLC1A5Q15758 541 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 HHATQ5VTY9 493 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 AGGF1Q8N302 714 aaeCLIP16.51■□□□□ 0.23
NUP88-207ENST00000573584 LPAR1Q92633 364 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 HAUS1Q96CS2 278 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 KIAA1683Q9H0B3 1180 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 A0A1W2PPM1 405 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 ATP2A1O14983 1001 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 CENPUQ71F23 418 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 DRG1Q9Y295 367 aaKnown RBP16.51■□□□□ 0.23
NUP88-207ENST00000573584 NFASCO94856 1347 aa16.51■□□□□ 0.23
NUP88-207ENST00000573584 TMEM191CA6NGB0 347 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 H0YCG3 227 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 ZBED4O75132 1171 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 IFNB1P01574 187 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 TMEM191BP0C7N4 346 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 NOP14P78316 857 aaKnown RBP16.5■□□□□ 0.23
NUP88-207ENST00000573584 PDIA2Q13087 525 aaKnown RBP16.5■□□□□ 0.23
NUP88-207ENST00000573584 FKBP1CQ5VVH2 108 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 KCNV2Q8TDN2 545 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 GMLQ99445 158 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 CYP26B1Q9NR63 512 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 RBAKQ9NYW8 714 aaPredicted RBP16.5■□□□□ 0.23
NUP88-207ENST00000573584 TELO2Q9Y4R8 837 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 F8VP50 259 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 DKC1O60832 514 aaKnown RBP eCLIP16.5■□□□□ 0.23
NUP88-207ENST00000573584 MMP8P22894 467 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 CCNG1P51959 295 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 CCDC142Q17RM4 750 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 WDR72Q3MJ13 1102 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 RNASEH2BQ5TBB1 312 aaKnown RBP16.5■□□□□ 0.23
NUP88-207ENST00000573584 PPP1R2P3Q6NXS1 205 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 ZNF449Q6P9G9 518 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 SPOCD1Q6ZMY3 1216 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 VSIG10LQ86VR7 867 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 FLAD1Q8NFF5 587 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 ZNF606Q8WXB4 792 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 ACSF2Q96CM8 615 aaPredicted RBP16.5■□□□□ 0.23
NUP88-207ENST00000573584 TMEM121Q9BTD3 319 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 NUB1Q9Y5A7 615 aa16.5■□□□□ 0.23
NUP88-207ENST00000573584 GOLGA8SH3BPF8 625 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 GOLGA8MH3BSY2 632 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 SGK1O00141 431 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 TYROBPO43914 113 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 PSAPP07602 524 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 CDC25CP30307 473 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 MCL1Q07820 350 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 BAATQ14032 418 aaPredicted RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 FAM83AQ86UY5 434 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 INPP5DQ92835 1189 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 ZBTB45Q96K62 511 aaPredicted RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 MAK16Q9BXY0 300 aaKnown RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 TRIM6Q9C030 488 aaPredicted RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 PSMC3IPQ9P2W1 217 aaPredicted RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 NKX1-2Q9UD57 310 aaPredicted RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 SLC24A2Q9UI40 661 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 SCAF8Q9UPN6 1271 aaKnown RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 ZNF541Q9H0D2 1346 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 NR3C2P08235 984 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 T-ENOLP0DO92 83 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 KRT4P19013 534 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 TBXAS1P24557 533 aaPredicted RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 CCND2P30279 289 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 VCPP55072 806 aaKnown RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 PRKCEQ02156 737 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 OASLQ15646 514 aaKnown RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 DCUN1D2Q6PH85 259 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 ANKMY2Q8IV38 441 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 MCEEQ96PE7 176 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 CNTN6Q9UQ52 1028 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 BANF1O75531 89 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 ZNF252P-AS1Q0IIN9 211 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 MTERF2Q49AM1 385 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 TFDP3Q5H9I0 405 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 TXNRD3NBQ6F5E7 133 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 LVRNQ6Q4G3 990 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 C10orf82Q8WW14 230 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 ZNF75CPQ92670 426 aaPredicted RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 GPRASP2Q96D09 838 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 TBC1D10AQ9BXI6 508 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 HAPLN2Q9GZV7 340 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 QTRT2Q9H974 415 aaKnown RBP16.49■□□□□ 0.23
NUP88-207ENST00000573584 PPCSQ9HAB8 311 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 SHOC2Q9UQ13 582 aa16.49■□□□□ 0.23
NUP88-207ENST00000573584 LRRD1A4D1F6 860 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 CBX6O95503 412 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 RASSF2P50749 326 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 RNASELQ05823 741 aaKnown RBP16.48■□□□□ 0.23
NUP88-207ENST00000573584 ZBTB41Q5SVQ8 909 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 LRRC38Q5VT99 294 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 OTOAQ7RTW8 1153 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 LONP2Q86WA8 852 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 CCDC60Q8IWA6 550 aaPredicted RBP16.48■□□□□ 0.23
NUP88-207ENST00000573584 FAM13CQ8NE31 585 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 SLC7A6OSQ96CW6 309 aaPredicted RBP16.48■□□□□ 0.23
NUP88-207ENST00000573584 RNPEPL1Q9HAU8 725 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 STYXL1Q9Y6J8 313 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms