RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, human

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG6-213	ENST00000573166	LRG1	P02750	347 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	PLEK	P08567	350 aa	Predicted RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	CYP11B1	P15538	503 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	C1QTNF8	P60827	252 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	TAP1	Q03518	808 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	GDF6	Q6KF10	455 aa	Predicted RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	DAW1	Q8N136	415 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	SYN2	Q92777	582 aa	Predicted RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	PBK	Q96KB5	322 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	HEMGN	Q9BXL5	484 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	DPH5	Q9H2P9	285 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	DHX35	Q9H5Z1	703 aa	Known RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	SSX2IP	Q9Y2D8	614 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	PARN	O95453	639 aa	Known RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	KRT7	P08729	469 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	HSPA1A	P0DMV8	641 aa	Known RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	HSPA1B	P0DMV9	641 aa	Known RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	CYP2C18	P33260	490 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	GYS2	P54840	703 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	CDR2	Q01850	454 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	NAB2	Q15742	525 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	MDH1B	Q5I0G3	518 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	RAD9B	Q6WBX8	426 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	RYBP	Q8N488	228 aa	Predicted RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	RIN2	Q8WYP3	895 aa	Predicted RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	SEZ6L	Q9BYH1	1024 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	C11orf49	Q9H6J7	331 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	KIF9	Q9HAQ2	790 aa		10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.69	□□□□□ -0.7
SMG6-213	ENST00000573166	TSPAN1	O60635	241 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	HMBS	P08397	361 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	IRX5	P78411	483 aa	Predicted RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	EFHC2	Q5JST6	749 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	TSHZ1	Q6ZSZ6	1077 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	MCEE	Q96PE7	176 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	ST6GALNAC4	Q9H4F1	302 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	DONSON	Q9NYP3	566 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	GIT1	Q9Y2X7	761 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	TNS1	Q9HBL0	1735 aa	Known RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166		A0A087X0T9	212 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166		I3L4J1	428 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	ATMIN	O43313	823 aa	Predicted RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	BNIP3L	O60238	219 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	MME	P08473	750 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	FAM228B	P0C875	321 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	GCNT1	Q02742	428 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	C2CD6	Q53TS8	623 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	DCAF6	Q58WW2	860 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	TMEM63B	Q5T3F8	832 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	CYP4A22	Q5TCH4	519 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	RUFY4	Q6ZNE9	571 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	ARHGEF19	Q8IW93	802 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	RBM41	Q96IZ5	413 aa	Known RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	ZFP42	Q96MM3	310 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	ZNF558	Q96NG5	402 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	NTPCR	Q9BSD7	190 aa	Known RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	LCMT1	Q9UIC8	334 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	C2CD2	Q9Y426	696 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	MYH8	P13535	1937 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	COL11A2	P13942	1736 aa	Predicted RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	GOLGA6C	A6NDK9	693 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	GOLGA6B	A6NDN3	693 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	MAPK13	O15264	365 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	GOLGA6D	P0CG33	693 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	SARNP	P82979	210 aa	Known RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	LMNB2	Q03252	620 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	MBTD1	Q05BQ5	628 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	TFDP2	Q14188	446 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	UAP1	Q16222	522 aa	Predicted RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	ZNF618	Q5T7W0	954 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	DARS2	Q6PI48	645 aa	Known RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	SLC47A2	Q86VL8	602 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	LRRN4CL	Q8ND94	238 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	MRRF	Q96E11	262 aa	Known RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	PGLYRP2	Q96PD5	576 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	KRT12	Q99456	494 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	IQCG	Q9H095	443 aa	Known RBP	10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	GOLGA6A	Q9NYA3	693 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	UVRAG	Q9P2Y5	699 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	HEY1	Q9Y5J3	304 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	SLC4A7	Q9Y6M7	1214 aa		10.68	□□□□□ -0.7
SMG6-213	ENST00000573166	CNTNAP2	Q9UHC6	1331 aa		10.67	□□□□□ -0.7
SMG6-213	ENST00000573166		A0A1W2PQ45	241 aa	Predicted RBP	10.67	□□□□□ -0.7
SMG6-213	ENST00000573166		A0A1W2PQY0	241 aa		10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	ATG7	O95352	703 aa		10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	FGG	P02679	453 aa		10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	PPARD	Q03181	441 aa		10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	MTFR1	Q15390	333 aa		10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	TADA2B	Q86TJ2	420 aa		10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	RHOT1	Q8IXI2	618 aa		10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	SLC35G2	Q8TBE7	412 aa		10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	TSEN34	Q9BSV6	310 aa	Known RBP	10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	PDZD7	Q9H5P4	517 aa		10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.67	□□□□□ -0.7
SMG6-213	ENST00000573166	MYH6	P13533	1939 aa		10.67	□□□□□ -0.7

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