RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
RPAIN-212ENST00000573126 BRSK2Q8IWQ3 736 aa11.87□□□□□ -0.51
RPAIN-212ENST00000573126 MRRFQ96E11 262 aaKnown RBP11.87□□□□□ -0.51
RPAIN-212ENST00000573126 KLRG1Q96E93 195 aa11.87□□□□□ -0.51
RPAIN-212ENST00000573126 TGS1Q96RS0 853 aaKnown RBP11.87□□□□□ -0.51
RPAIN-212ENST00000573126 CISHQ9NSE2 258 aa11.87□□□□□ -0.51
RPAIN-212ENST00000573126 SAE1Q9UBE0 346 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-212ENST00000573126 AGAP1Q9UPQ3 857 aa11.87□□□□□ -0.51
RPAIN-212ENST00000573126 USP15Q9Y4E8 981 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-212ENST00000573126 EXOC1LA0A1B0GW35 172 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 DNAJC8O75937 253 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 UBOX5O94941 541 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 PECAM1P16284 738 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 TCF7P36402 384 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 ALDH5A1P51649 535 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 SMTNL2Q2TAL5 461 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 LRRC71Q8N4P6 559 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 ZCCHC9Q8N567 271 aaKnown RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 BBOF1Q8ND07 529 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 TRPM4Q8TD43 1214 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 TFAP2BQ92481 460 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 RBM41Q96IZ5 413 aaKnown RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 PAIP2Q9BPZ3 127 aaKnown RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 TMEM121Q9BTD3 319 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 NIFKQ9BYG3 293 aaKnown RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 FAM189A1O60320 539 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 MSCO60682 206 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 TCEA3O75764 348 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 TJP3O95049 919 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 DYNLT1P63172 113 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 TARBP2Q15633 366 aaKnown RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 SNCBQ16143 134 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 DLK2Q6UY11 383 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 SPOCD1Q6ZMY3 1216 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 TBC1D1Q86TI0 1168 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 FAM228AQ86W67 206 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 RCOR2Q8IZ40 523 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 RNF149Q8NC42 400 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 CKAP2Q8WWK9 683 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 CCDC77Q9BR77 488 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 C10orf88Q9H8K7 445 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 KIF9Q9HAQ2 790 aa11.86□□□□□ -0.51
RPAIN-212ENST00000573126 TPX2Q9ULW0 747 aaKnown RBP11.86□□□□□ -0.51
RPAIN-212ENST00000573126 RGPD3A6NKT7 1758 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-212ENST00000573126 RGPD4Q7Z3J3 1758 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 IGKV6D-21A0A0A0MT36 114 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 POC1B-GALNT4F8VUJ3 575 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 GOLGA8SH3BPF8 625 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 GOLGA8MH3BSY2 632 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 CHUKO15111 745 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 SPAG7O75391 227 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 TOM1L1O75674 476 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 OAS1P00973 400 aaKnown RBP11.85□□□□□ -0.51
RPAIN-212ENST00000573126 ICAM3P32942 547 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 MTM1Q13496 603 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 STAT4Q14765 748 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 LY6KQ17RY6 165 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 KCNT1Q5JUK3 1230 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 TREML2Q5T2D2 321 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 CEP57Q86XR8 500 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 WDR49Q8IV35 697 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 TMEM130Q8N3G9 435 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 WDTC1Q8N5D0 677 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 DNERQ8NFT8 737 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 TCP11Q8WWU5 503 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 TMEM134Q9H6X4 195 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 NKIRAS1Q9NYS0 192 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 GGA3Q9NZ52 723 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 TJP2Q9UDY2 1190 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 LGALS13Q9UHV8 139 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 AFG3L2Q9Y4W6 797 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 DOCK1Q14185 1865 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 DNALI1O14645 258 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-212ENST00000573126 BANF1O75531 89 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 CALB1P05937 261 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 GJB1P08034 283 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 WDR72Q3MJ13 1102 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 ARHGEF18Q6ZSZ5 1173 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 FAM47EQ6ZV65 393 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 PNMA8AQ86V59 439 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-212ENST00000573126 THNSL1Q8IYQ7 743 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 TAB3Q8N5C8 712 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-212ENST00000573126 ALLCQ8N6M5 410 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 UBR7Q8N806 425 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 CEP120Q8N960 986 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 TMEM35BQ8NCS4 154 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 NRBP2Q9NSY0 501 aa11.85□□□□□ -0.51
RPAIN-212ENST00000573126 NXF1Q9UBU9 619 aaKnown RBP11.85□□□□□ -0.51
RPAIN-212ENST00000573126 TCRBV5S1A1TA0A578 114 aa11.84□□□□□ -0.51
RPAIN-212ENST00000573126 SGK1O00141 431 aa11.84□□□□□ -0.51
RPAIN-212ENST00000573126 PIAS1O75925 651 aa11.84□□□□□ -0.51
RPAIN-212ENST00000573126 SUN1O94901 812 aa11.84□□□□□ -0.51
RPAIN-212ENST00000573126 RFC5P40937 340 aa11.84□□□□□ -0.51
RPAIN-212ENST00000573126 ELF3P78545 371 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-212ENST00000573126 LMNB2Q03252 620 aa11.84□□□□□ -0.51
RPAIN-212ENST00000573126 ORC1Q13415 861 aa11.84□□□□□ -0.51
RPAIN-212ENST00000573126 TRPC3Q13507 836 aa11.84□□□□□ -0.51
RPAIN-212ENST00000573126 EAPPQ56P03 285 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms