RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 PIRO00625 290 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 PPEF2O14830 753 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 HNRNPDLO14979 420 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 SOAT2O75908 522 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 PIGRP01833 764 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 GABRR2P28476 465 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 CACNB1Q02641 598 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 SRSF5Q13243 272 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 CCINQ13939 588 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 PON2Q15165 354 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 TMEM119Q4V9L6 283 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 C9orf57Q5W0N0 161 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 ARL6IP4Q66PJ3 421 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 HEATR6Q6AI08 1181 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 JADE1Q6IE81 842 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 PRR23CQ6ZRP0 262 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 TTC9BQ8N6N2 239 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 OR10T2Q8NGX3 314 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 BPIFB1Q8TDL5 484 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 ZFYVE19Q96K21 471 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 SENP8Q96LD8 212 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 TMEM209Q96SK2 561 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 MSTO1Q9BUK6 570 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 TASP1Q9H6P5 420 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 C2orf42Q9NWW7 574 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 PPP4R2Q9NY27 417 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 CPSF3Q9UKF6 684 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 ODF2LQ9ULJ1 636 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 COL4A2P08572 1712 aa10.7□□□□□ -0.7
TRAPPC1-205ENST00000572656 SLC26A4O43511 780 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 KRT37O76014 449 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 PRAMEF12O95522 483 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 CYP11A1P05108 521 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 CDC25CP30307 473 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 ZNF131P52739 623 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 TNK2Q07912 1038 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 VEPH1Q14D04 833 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 PTPAQ15257 358 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 SLC39A12Q504Y0 691 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 PPM1JQ5JR12 505 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 MCTP1Q6DN14 999 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 CEP68Q76N32 757 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 WDR5BQ86VZ2 330 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 FAM160A2Q8N612 972 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 MYCT1Q8N699 235 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 FAM212AQ96EL1 285 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 KIF2CQ99661 725 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 SEPT5Q99719 369 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 LPIN3Q9BQK8 851 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 REEP2Q9BRK0 252 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 ZCWPW1Q9H0M4 648 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 IL21Q9HBE4 155 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 THG1LQ9NWX6 298 aaKnown RBP10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 ZMYM5Q9UJ78 669 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 DSEQ9UL01 958 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 DERAQ9Y315 318 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 KIF3AQ9Y496 699 aa10.69□□□□□ -0.7
TRAPPC1-205ENST00000572656 EPG5Q9HCE0 2579 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 ANO9A1A5B4 782 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 K7ENM7 598 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 GDF9O60383 454 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 FAM13AO94988 1023 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 NFICP08651 508 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 ATF6P18850 670 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 ABCD1P33897 745 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 MCM2P49736 904 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 CYP4F8P98187 520 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 SMARCB1Q12824 385 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 TMEM132DQ14C87 1099 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 TAF12Q16514 161 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 ITPRIPL2Q3MIP1 535 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 MGAT5BQ3V5L5 792 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 SLC39A4Q6P5W5 647 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 GPBP1Q86WP2 473 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 METTL23Q86XA0 190 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 THEM5Q8N1Q8 247 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 C2orf15Q8WU43 125 aaKnown RBP10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 DDX1Q92499 740 aaKnown RBP10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 AK8Q96MA6 479 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 GCNAQ96QF7 691 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 SLC46A2Q9BY10 475 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 ASB7Q9H672 318 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 PARVGQ9HBI0 331 aa10.68□□□□□ -0.7
TRAPPC1-205ENST00000572656 CCDC163A0A0D9SF12 145 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 CYB561D2O14569 222 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 EXTL3O43909 919 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 TRAK2O60296 914 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 HAPLN1P10915 354 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 HOXC13P31276 330 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 GTF2BQ00403 316 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 CMTM8Q8IZV2 173 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 SPPL2BQ8TCT7 592 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 GIPC2Q8TF65 315 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 CALML4Q96GE6 196 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 LOXL4Q96JB6 756 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 FAM83CQ9BQN1 747 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 SMG9Q9H0W8 520 aaKnown RBP10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 GKN1Q9NS71 199 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 C2CD2Q9Y426 696 aa10.67□□□□□ -0.7
TRAPPC1-205ENST00000572656 KMT2BQ9UMN6 2715 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms