RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 CARD9Q9H257 536 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 STARD7Q9NQZ5 370 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 PARVAQ9NVD7 372 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 TUBGCP4Q9UGJ1 667 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 TRIM17Q9Y577 477 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 PDE2AO00408 941 aaPredicted RBP20.65■□□□□ 0.9
RPAIN-210ENST00000571613 ZNF623O75123 536 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 TFRCP02786 760 aaKnown RBP20.65■□□□□ 0.9
RPAIN-210ENST00000571613 FAM163BP0C2L3 166 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 RRM1P23921 792 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 TAP1Q03518 808 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 MESDQ14696 234 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 CNGA2Q16280 664 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 SV2CQ496J9 727 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 GLRA4Q5JXX5 417 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 PLEKHA7Q6IQ23 1121 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 MRPL10Q7Z7H8 261 aaKnown RBP20.65■□□□□ 0.9
RPAIN-210ENST00000571613 SLC4A11Q8NBS3 891 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 WHAMMQ8TF30 809 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 NAP1L3Q99457 506 aaPredicted RBP20.65■□□□□ 0.9
RPAIN-210ENST00000571613 RNF39Q9H2S5 420 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 GOLPH3Q9H4A6 298 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 GDAP2Q9NXN4 497 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 KLK14Q9P0G3 267 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 PADI3Q9ULW8 664 aa20.65■□□□□ 0.9
RPAIN-210ENST00000571613 CCDC66A2RUB6 948 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 MYO1FO00160 1098 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 LRPAP1P30533 357 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 TAF6P49848 677 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 TRIM71Q2Q1W2 868 aaKnown RBP20.64■□□□□ 0.9
RPAIN-210ENST00000571613 SGO2Q562F6 1265 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 TFAP2BQ92481 460 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 RUBCNQ92622 972 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 C18orf25Q96B23 403 aaPredicted RBP20.64■□□□□ 0.9
RPAIN-210ENST00000571613 C11orf70Q9BRQ4 267 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 MIS12Q9H081 205 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 UBN1Q9NPG3 1134 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 TTC7AQ9ULT0 858 aaPredicted RBP20.64■□□□□ 0.9
RPAIN-210ENST00000571613 PHF24Q9UPV7 400 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 SNX9Q9Y5X1 595 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 PTCH2Q9Y6C5 1203 aa20.64■□□□□ 0.9
RPAIN-210ENST00000571613 A0A1W2PQ45 241 aaPredicted RBP20.64■□□□□ 0.89
RPAIN-210ENST00000571613 A0A1W2PQY0 241 aa20.64■□□□□ 0.89
RPAIN-210ENST00000571613 TARSL2A2RTX5 802 aaKnown RBP20.64■□□□□ 0.89
RPAIN-210ENST00000571613 ATMINO43313 823 aaPredicted RBP20.64■□□□□ 0.89
RPAIN-210ENST00000571613 DNA2P51530 1060 aa20.64■□□□□ 0.89
RPAIN-210ENST00000571613 PTP4A2Q12974 167 aa20.64■□□□□ 0.89
RPAIN-210ENST00000571613 DPH6Q7L8W6 267 aa20.64■□□□□ 0.89
RPAIN-210ENST00000571613 ERICH1Q86X53 443 aa20.64■□□□□ 0.89
RPAIN-210ENST00000571613 RASGEF1CQ8N431 466 aa20.64■□□□□ 0.89
RPAIN-210ENST00000571613 PGBD4Q96DM1 585 aa20.64■□□□□ 0.89
RPAIN-210ENST00000571613 HEXIM2Q96MH2 286 aaKnown RBP20.64■□□□□ 0.89
RPAIN-210ENST00000571613 ELOVL4Q9GZR5 314 aa20.64■□□□□ 0.89
RPAIN-210ENST00000571613 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.64■□□□□ 0.89
RPAIN-210ENST00000571613 TRMT13Q9NUP7 481 aaKnown RBP20.64■□□□□ 0.89
RPAIN-210ENST00000571613 WDR35Q9P2L0 1181 aa20.64■□□□□ 0.89
RPAIN-210ENST00000571613 ANAPC7Q9UJX3 599 aa20.64■□□□□ 0.89
RPAIN-210ENST00000571613 PGRMC1O00264 195 aaKnown RBP20.63■□□□□ 0.89
RPAIN-210ENST00000571613 SPOPO43791 374 aa20.63■□□□□ 0.89
RPAIN-210ENST00000571613 CEP104O60308 925 aa20.63■□□□□ 0.89
RPAIN-210ENST00000571613 CAPN15O75808 1086 aa20.63■□□□□ 0.89
RPAIN-210ENST00000571613 CFHP08603 1231 aa20.63■□□□□ 0.89
RPAIN-210ENST00000571613 H2AFXP16104 143 aaPredicted RBP20.63■□□□□ 0.89
RPAIN-210ENST00000571613 NDST1P52848 882 aa20.63■□□□□ 0.89
RPAIN-210ENST00000571613 GLE1Q53GS7 698 aaKnown RBP20.63■□□□□ 0.89
RPAIN-210ENST00000571613 MMS22LQ6ZRQ5 1243 aa20.63■□□□□ 0.89
RPAIN-210ENST00000571613 PDCL2Q8N4E4 241 aa20.63■□□□□ 0.89
RPAIN-210ENST00000571613 NOA1Q8NC60 698 aaKnown RBP20.63■□□□□ 0.89
RPAIN-210ENST00000571613 PPP1R10Q96QC0 940 aaKnown RBP20.63■□□□□ 0.89
RPAIN-210ENST00000571613 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.63■□□□□ 0.893e-12■■□□□ 13.8
RPAIN-210ENST00000571613 PLVAPQ9BX97 442 aa20.63■□□□□ 0.89
RPAIN-210ENST00000571613 AGO3Q9H9G7 860 aaKnown RBP20.63■□□□□ 0.89
RPAIN-210ENST00000571613 KPNA7A9QM74 516 aa20.62■□□□□ 0.89
RPAIN-210ENST00000571613 DDX3YO15523 660 aaKnown RBP20.62■□□□□ 0.89
RPAIN-210ENST00000571613 GHRP10912 638 aa20.62■□□□□ 0.89
RPAIN-210ENST00000571613 COMTP21964 271 aa20.62■□□□□ 0.89
RPAIN-210ENST00000571613 CTNNA2P26232 953 aa20.62■□□□□ 0.89
RPAIN-210ENST00000571613 LPIN1Q14693 890 aa20.62■□□□□ 0.89
RPAIN-210ENST00000571613 BRD3Q15059 726 aa20.62■□□□□ 0.89
RPAIN-210ENST00000571613 C1orf131Q8NDD1 294 aaKnown RBP20.62■□□□□ 0.89
RPAIN-210ENST00000571613 ZSWIM1Q9BR11 485 aa20.62■□□□□ 0.89
RPAIN-210ENST00000571613 PARD6BQ9BYG5 372 aa20.62■□□□□ 0.89
RPAIN-210ENST00000571613 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.62■□□□□ 0.89
RPAIN-210ENST00000571613 ARVCFO00192 962 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 THP07101 528 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 PAX3P23760 479 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 CD52P31358 61 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 MAMLD1Q13495 774 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 DSC3Q14574 896 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 PPP2R5EQ16537 467 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.61■□□□□ 0.89
RPAIN-210ENST00000571613 FEZF2Q8TBJ5 459 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 CXCL16Q9H2A7 254 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 RAB21Q9UL25 225 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 PDCD11Q14690 1871 aaKnown RBP20.61■□□□□ 0.89
RPAIN-210ENST00000571613 A0A0U1RQF3 1178 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 CCDC151A5D8V7 595 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 TMEM110-MUSTN1A8MSY1 372 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 CCDC188H7C350 402 aa20.61■□□□□ 0.89
RPAIN-210ENST00000571613 O00370 1275 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms