RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 LHX6Q9UPM6 363 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 SLC27A5Q9Y2P5 690 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 WDFY3Q8IZQ1 3526 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 ASCC3Q8N3C0 2202 aaKnown RBP12.34□□□□□ -0.43
CHMP6-202ENST00000571457 LNP1A1A4G5 178 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 PFKFB2O60825 505 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 APBB3O95704 486 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 SPINK2P20155 84 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 GBP1P32455 592 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 NPTX2P47972 431 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 TUFMP49411 452 aaKnown RBP12.34□□□□□ -0.43
CHMP6-202ENST00000571457 PEX3P56589 373 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 RUNX3Q13761 415 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 TRIM29Q14134 588 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 CENPQQ7L2Z9 268 aaPredicted RBP12.34□□□□□ -0.43
CHMP6-202ENST00000571457 SYT13Q7L8C5 426 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 DIS3L2Q8IYB7 885 aaKnown RBP12.34□□□□□ -0.43
CHMP6-202ENST00000571457 ACDQ96AP0 544 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 HHIPQ96QV1 700 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 FAM83CQ9BQN1 747 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 TARS2Q9BW92 718 aaKnown RBP12.34□□□□□ -0.43
CHMP6-202ENST00000571457 TMEM60Q9H2L4 133 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 BHMT2Q9H2M3 363 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 CRISPLD1Q9H336 500 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 POLD4Q9HCU8 107 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 EBF1Q9UH73 591 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 TIMM13Q9Y5L4 95 aaPredicted RBP12.34□□□□□ -0.43
CHMP6-202ENST00000571457 EML5Q05BV3 1969 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 PCNX2A6NKB5 2137 aa12.34□□□□□ -0.43
CHMP6-202ENST00000571457 KIF26AQ9ULI4 1882 aaPredicted RBP12.34□□□□□ -0.43
CHMP6-202ENST00000571457 GON4LQ3T8J9 2241 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 MTMR11A4FU01 709 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 BTBD18B2RXH4 712 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 OR4Q2P0C623 313 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 HARSP12081 509 aaKnown RBP12.33□□□□□ -0.44
CHMP6-202ENST00000571457 TYMPP19971 482 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 MCM7P33993 719 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 AVPR1AP37288 418 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 RING1Q06587 406 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 BFSP1Q12934 665 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 NOLC1Q14978 699 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHMP6-202ENST00000571457 TAF12Q16514 161 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 OVOS1Q6IE37 1185 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 CC2D1AQ6P1N0 951 aaPredicted RBP12.33□□□□□ -0.44
CHMP6-202ENST00000571457 DSTYKQ6XUX3 929 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 SKAP1Q86WV1 359 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 CMTM8Q8IZV2 173 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 ABCA7Q8IZY2 2146 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 ATAD1Q8NBU5 361 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 CCDC26Q8TAB7 109 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 DRC1Q96MC2 740 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 SLC32A1Q9H598 525 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 C17orf75Q9HAS0 396 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 PLEKHA5Q9HAU0 1116 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 KMT5AQ9NQR1 393 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 ARHGAP28Q9P2N2 729 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 TUBGCP4Q9UGJ1 667 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 KCNG1Q9UIX4 513 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 NEUROG3Q9Y4Z2 214 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 NUP205Q92621 2012 aa12.33□□□□□ -0.44
CHMP6-202ENST00000571457 LAMA5O15230 3695 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 ACACAQ13085 2346 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 WNT7AO00755 349 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 ABLIM1O14639 778 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 DCLK1O15075 740 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 XPOTO43592 962 aaKnown RBP12.32□□□□□ -0.44
CHMP6-202ENST00000571457 TOM1L1O75674 476 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 EGFP01133 1207 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 CYP3A5P20815 502 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 PAX3P23760 479 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 LRPAP1P30533 357 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 CCT6AP40227 531 aaKnown RBP12.32□□□□□ -0.44
CHMP6-202ENST00000571457 AARSP49588 968 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHMP6-202ENST00000571457 DGKEP52429 567 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 CYP4F8P98187 520 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 STRN3Q13033 797 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 ORC2Q13416 577 aaPredicted RBP12.32□□□□□ -0.44
CHMP6-202ENST00000571457 PDGFRLQ15198 375 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 SLC10A6Q3KNW5 377 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 USP39Q53GS9 565 aaKnown RBP12.32□□□□□ -0.44
CHMP6-202ENST00000571457 CYP2U1Q7Z449 544 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 KIF12Q96FN5 646 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 P2RY13Q9BPV8 354 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 SLC46A2Q9BY10 475 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 EBF3Q9H4W6 596 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 KIF9Q9HAQ2 790 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 HPS4Q9NQG7 708 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 ANKFY1Q9P2R3 1169 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 UBQLN1Q9UMX0 589 aaKnown RBP12.32□□□□□ -0.44
CHMP6-202ENST00000571457 STK24Q9Y6E0 443 aa12.32□□□□□ -0.44
CHMP6-202ENST00000571457 CLDN3O15551 220 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 MEFVO15553 781 aaPredicted RBP12.31□□□□□ -0.44
CHMP6-202ENST00000571457 SOAT2O75908 522 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 LARGE1O95461 756 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 CTDNEP1O95476 244 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 TOP3BO95985 862 aaKnown RBP12.31□□□□□ -0.44
CHMP6-202ENST00000571457 CLTAP09496 248 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 OR52Z1P0C646 297 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 ODC1P11926 461 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 FDPSP14324 419 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms