RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 GRM5P41594 1212 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 NOMO3P69849 1222 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 SLC10A6Q3KNW5 377 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 LRRC8DQ7L1W4 858 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 HDXQ7Z353 690 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 UBL4BQ8N7F7 174 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 CYFIP2Q96F07 1278 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 ACAP3Q96P50 834 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 WNT8AQ9H1J5 351 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 HIPK3Q9H422 1215 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 VRTNQ9H8Y1 702 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 CISHQ9NSE2 258 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 STIM2Q9P246 746 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 C2CD2Q9Y426 696 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 SPDYE4A6NLX3 237 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 MEFVO15553 781 aaPredicted RBP18.44■□□□□ 0.54
RPAIN-208ENST00000571043 ATMINO43313 823 aaPredicted RBP18.44■□□□□ 0.54
RPAIN-208ENST00000571043 THAP12O43422 761 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 NFICP08651 508 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 TNFRSF8P28908 595 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 ASPAP45381 313 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 MESDQ14696 234 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 MBTPS1Q14703 1052 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 PTPROQ16827 1216 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 LIN9Q5TKA1 542 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 NAA35Q5VZE5 725 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 JADE1Q6IE81 842 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 MON1BQ7L1V2 547 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 FAM228AQ86W67 206 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 PHF13Q86YI8 300 aaPredicted RBP18.44■□□□□ 0.54
RPAIN-208ENST00000571043 C1orf127Q8N9H9 656 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 ZNF606Q8WXB4 792 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 NAP1L3Q99457 506 aaPredicted RBP18.44■□□□□ 0.54
RPAIN-208ENST00000571043 OSBPL7Q9BZF2 842 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 SIX4Q9UIU6 781 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 SCN5AQ14524 2016 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 KIAA0355O15063 1070 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 RPS6KA5O75582 802 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 SASH3O75995 380 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 LSM8O95777 96 aaKnown RBP18.43■□□□□ 0.54
RPAIN-208ENST00000571043 COMTP21964 271 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 FGFR4P22455 802 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 CTNNA2P26232 953 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 RNASE9P60153 205 aaKnown RBP18.43■□□□□ 0.54
RPAIN-208ENST00000571043 C1QBPQ07021 282 aaKnown RBP18.43■□□□□ 0.54
RPAIN-208ENST00000571043 LPIN1Q14693 890 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 GPNMBQ14956 572 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 ZNF667Q5HYK9 610 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 CATSPER4Q7RTX7 472 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 CPA5Q8WXQ8 436 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 CD101Q93033 1021 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 ZSWIM1Q9BR11 485 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 BCO2Q9BYV7 579 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 AGO3Q9H9G7 860 aaKnown RBP18.43■□□□□ 0.54
RPAIN-208ENST00000571043 PLEKHA5Q9HAU0 1116 aa18.43■□□□□ 0.54
RPAIN-208ENST00000571043 DMGDHQ9UI17 866 aaKnown RBP18.43■□□□□ 0.54
RPAIN-208ENST00000571043 FAM170AA1A519 330 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 TRIM43BA6NCK2 446 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 GPR182O15218 404 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 PARNO95453 639 aaKnown RBP18.42■□□□□ 0.54
RPAIN-208ENST00000571043 STAU1O95793 577 aaKnown RBP18.42■□□□□ 0.54
RPAIN-208ENST00000571043 AXLP30530 894 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 HOXA11P31270 313 aaPredicted RBP18.42■□□□□ 0.54
RPAIN-208ENST00000571043 TMEM132DQ14C87 1099 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 CXorf38Q8TB03 319 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 HDAC7Q8WUI4 952 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 TRIM43Q96BQ3 446 aaPredicted RBP18.42■□□□□ 0.54
RPAIN-208ENST00000571043 KRT12Q99456 494 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 ZNF518BQ9C0D4 1074 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 FAM124BQ9H5Z6 455 aaPredicted RBP18.42■□□□□ 0.54
RPAIN-208ENST00000571043 ST3GAL5Q9UNP4 418 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 DERAQ9Y315 318 aa18.42■□□□□ 0.54
RPAIN-208ENST00000571043 CCDC66A2RUB6 948 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 TMEM110-MUSTN1A8MSY1 372 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 KRIT1O00522 736 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 KRT19P08727 400 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 GHRP10912 638 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 RRM1P23921 792 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 CYP2C18P33260 490 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 PEX5P50542 639 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 PPP2R5EQ16537 467 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 DCAF12L1Q5VU92 463 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 SLC27A1Q6PCB7 646 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 IFT20Q8IY31 132 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 PPP1R12CQ9BZL4 782 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 CYP3A43Q9HB55 503 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 MRPL47Q9HD33 250 aaKnown RBP18.41■□□□□ 0.54
RPAIN-208ENST00000571043 ERVK-5Q9HDB9 667 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 ADAM22Q9P0K1 906 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 CHORDC1Q9UHD1 332 aaPredicted RBP18.41■□□□□ 0.54
RPAIN-208ENST00000571043 ITGA11Q9UKX5 1188 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 PADI3Q9ULW8 664 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 PCDHGC3Q9UN70 934 aa18.41■□□□□ 0.54
RPAIN-208ENST00000571043 TANC1Q9C0D5 1861 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 NBNO60934 754 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 TIMP1P01033 207 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 ITGB3P05106 788 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 PAEPP09466 180 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 WEE2P0C1S8 567 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 P4HA1P13674 534 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms