RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CCDC105Q8IYK2 499 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 IQUBQ8NA54 791 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 KCNG4Q8TDN1 519 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 NOC3LQ8WTT2 800 aaKnown RBP13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 DHX58Q96C10 678 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 SAAL1Q96ER3 474 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 SHDQ96IW2 340 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 ZNF560Q96MR9 790 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 PHOX2BQ99453 314 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 FGFBP2Q9BYJ0 223 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 TMEM206Q9H813 350 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 RBAKQ9NYW8 714 aaPredicted RBP13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 DOCK8Q8NF50 2099 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 CYB561D2O14569 222 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 ECI2O75521 394 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 MICAL2O94851 1124 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 PRPF6O94906 941 aaKnown RBP13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 LDHAP00338 332 aaKnown RBP13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 F13A1P00488 732 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 CYP11A1P05108 521 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 MYL4P12829 197 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 ALDH1A3P47895 512 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 ME1P48163 572 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 EPHB3P54753 998 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 ASIC1P78348 528 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 TFAMQ00059 246 aaKnown RBP13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 DUSP4Q13115 394 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 E2F4Q16254 413 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 SV2CQ496J9 727 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 PHLDB3Q6NSJ2 640 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 TCEAL4Q96EI5 215 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 PYM1Q9BRP8 204 aaKnown RBP13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 CBWD1Q9BRT8 395 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 TRIM9Q9C026 710 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 MAGEF1Q9HAY2 307 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 KBTBD4Q9NVX7 518 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 CEP72Q9P209 647 aa13.35□□□□□ -0.27
CTDNEP1-205ENST00000570828 PDCD11Q14690 1871 aaKnown RBP13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 MTMR11A4FU01 709 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 GOLGA8IPA6NC78 632 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 GOLGA8JA6NMD2 632 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 PPP1R3GB7ZBB8 358 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 EXTL3O43909 919 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 VNN2O95498 520 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 PNPLA4P41247 253 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 CCR2P41597 374 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 ATL3Q6DD88 541 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 CENPPQ6IPU0 288 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 SHC4Q6S5L8 630 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 THEM5Q8N1Q8 247 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 DTWD2Q8NBA8 298 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 ATAD1Q8NBU5 361 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 CACTINQ8WUQ7 758 aaKnown RBP13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 ELSPBP1Q96BH3 223 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 TMEM209Q96SK2 561 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 SLITRK6Q9H5Y7 841 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 FAM13BQ9NYF5 915 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 SIT1Q9Y3P8 196 aa13.34□□□□□ -0.27
CTDNEP1-205ENST00000570828 KPNA7A9QM74 516 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 KIAA0391O15091 583 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 ITGB3P05106 788 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 POLR2BP30876 1174 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 EPHA5P54756 1037 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 PRKCQQ04759 706 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 SNW1Q13573 536 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 ANGPT1Q15389 498 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 MLF2Q15773 248 aaPredicted RBP13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 SLC39A12Q504Y0 691 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 FAM78AQ5JUQ0 283 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 FAM26FQ5R3K3 315 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 WSCD1Q658N2 575 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 TANGO2Q6ICL3 276 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 NYAP1Q6ZVC0 841 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 GPD1LQ8N335 351 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 ZSWIM2Q8NEG5 633 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 SMARCD2Q92925 531 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 HPS3Q969F9 1004 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 ASB16Q96NS5 453 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 SEPT5Q99719 369 aaPredicted RBP13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 FOXQ1Q9C009 403 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 CRISPLD1Q9H336 500 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 PCIF1Q9H4Z3 704 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 ZFP14Q9HCL3 533 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 HSFX1Q9UBD0 423 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 ITGA11Q9UKX5 1188 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 CFAP45Q9UL16 551 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 SLC27A5Q9Y2P5 690 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 ASB3Q9Y575 518 aa13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 ZFHX2Q9C0A1 2572 aaPredicted RBP13.33□□□□□ -0.28
CTDNEP1-205ENST00000570828 EIF3DO15371 548 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 POLR2DO15514 142 aaKnown RBP13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 DCNP07585 359 aaKnown RBP13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 TMEM191BP0C7N4 346 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 GJA1P17302 382 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 FCARP24071 287 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 WNT7BP56706 349 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 STARD6P59095 220 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 PKP1Q13835 747 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 GRM2Q14416 872 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms