RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SMOC2Q9H3U7 446 aa15.59■□□□□ 0.09
COMMD4-225ENST00000569245 HCFC1R1Q9NWW0 138 aa15.59■□□□□ 0.09
COMMD4-225ENST00000569245 EPS15L1Q9UBC2 864 aa15.59■□□□□ 0.09
COMMD4-225ENST00000569245 MAFFQ9ULX9 164 aa15.59■□□□□ 0.09
COMMD4-225ENST00000569245 KPNA7A9QM74 516 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 TNNC2P02585 160 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 POU2F2P09086 479 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 LAMP2P13473 410 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 CD44P16070 742 aaKnown RBP15.58■□□□□ 0.08
COMMD4-225ENST00000569245 PTPN2P17706 415 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 PRCPP42785 496 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 ZNF165P49910 485 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 RBP5P82980 135 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 STIM1Q13586 685 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 MYBPC2Q14324 1141 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 SURF1Q15526 300 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 SNRNP35Q16560 246 aaKnown RBP15.58■□□□□ 0.08
COMMD4-225ENST00000569245 LMBRD2Q68DH5 695 aaPredicted RBP15.58■□□□□ 0.08
COMMD4-225ENST00000569245 SMYD4Q8IYR2 804 aaPredicted RBP15.58■□□□□ 0.08
COMMD4-225ENST00000569245 THEM5Q8N1Q8 247 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 GUF1Q8N442 669 aaKnown RBP15.58■□□□□ 0.08
COMMD4-225ENST00000569245 C1orf127Q8N9H9 656 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 XXYLT1Q8NBI6 393 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 DHTKD1Q96HY7 919 aaPredicted RBP15.58■□□□□ 0.08
COMMD4-225ENST00000569245 ANKRD36BP1Q96IX9 119 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 FAM84AQ96KN4 292 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 MTMR12Q9C0I1 747 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 IGSF9Q9P2J2 1179 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 DNMT3BQ9UBC3 853 aaKnown RBP15.58■□□□□ 0.08
COMMD4-225ENST00000569245 ITGA11Q9UKX5 1188 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 MRPS23Q9Y3D9 190 aaKnown RBP15.58■□□□□ 0.08
COMMD4-225ENST00000569245 INSL5Q9Y5Q6 135 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 VWA8A3KMH1 1905 aa15.58■□□□□ 0.08
COMMD4-225ENST00000569245 KIF20AO95235 890 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 CYP11A1P05108 521 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 RHOP08100 348 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 DLATP10515 647 aaKnown RBP15.57■□□□□ 0.08
COMMD4-225ENST00000569245 TWF1Q12792 350 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 BFSP1Q12934 665 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 GPR17Q13304 367 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 IQCB1Q15051 598 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 DUOXA2Q1HG44 320 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 BMT2Q1RMZ1 405 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 WSCD1Q658N2 575 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 IQCEQ6IPM2 695 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 SUGP1Q8IWZ8 645 aaKnown RBP15.57■□□□□ 0.08
COMMD4-225ENST00000569245 ST13P5Q8NFI4 369 aaPredicted RBP15.57■□□□□ 0.08
COMMD4-225ENST00000569245 ITFG1Q8TB96 612 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 GOLGA5Q8TBA6 731 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 RSAD2Q8WXG1 361 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 CCDC127Q96BQ5 260 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 ZNF512Q96ME7 567 aaPredicted RBP15.57■□□□□ 0.08
COMMD4-225ENST00000569245 FNBP1Q96RU3 617 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 CORO1BQ9BR76 489 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 RBSNQ9H1K0 784 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 CBX8Q9HC52 389 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 INTS13Q9NVM9 706 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 CGNQ9P2M7 1197 aaKnown RBP15.57■□□□□ 0.08
COMMD4-225ENST00000569245 CDH7Q9ULB5 785 aa15.57■□□□□ 0.08
COMMD4-225ENST00000569245 ZFP37Q9Y6Q3 630 aaPredicted RBP15.57■□□□□ 0.08
COMMD4-225ENST00000569245 PSMA7O14818 248 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 IKBKBO14920 756 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 EXOC3O60645 756 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 HUS1O60921 280 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 TNNI1P19237 187 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 MYO1EQ12965 1108 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 DUSP4Q13115 394 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 SLC39A12Q504Y0 691 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 CYP4A22Q5TCH4 519 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 ING5Q8WYH8 240 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 FGF13Q92913 245 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 NXPE3Q969Y0 559 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 TMEM209Q96SK2 561 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 SLC27A5Q9Y2P5 690 aa15.56■□□□□ 0.08
COMMD4-225ENST00000569245 GOLGA6L3A6NEY3 463 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 SMTNL1A8MU46 457 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 ALDH1A3P47895 512 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 CDR1P51861 262 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 EPHB3P54753 998 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 CYP24A1Q07973 514 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 PAK1Q13153 545 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 PLD1Q13393 1074 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 FOXR2Q6PJQ5 311 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 PDZD4Q76G19 769 aaPredicted RBP15.55■□□□□ 0.08
COMMD4-225ENST00000569245 BMP8AQ7Z5Y6 402 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 WDR49Q8IV35 697 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 DHX40Q8IX18 779 aaKnown RBP15.55■□□□□ 0.08
COMMD4-225ENST00000569245 LRRC52Q8N7C0 313 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 ATAD1Q8NBU5 361 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 OR5B17Q8NGF7 314 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 OR10T2Q8NGX3 314 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 ENOX1Q8TC92 643 aaKnown RBP15.55■□□□□ 0.08
COMMD4-225ENST00000569245 ASIC4Q96FT7 647 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 BORCS6Q96GS4 357 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 MFSD1Q9H3U5 465 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 RWDD2AQ9UIY3 292 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 FBXL21Q9UKT6 434 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 YIPF1Q9Y548 306 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 SNX9Q9Y5X1 595 aa15.55■□□□□ 0.08
COMMD4-225ENST00000569245 PTPRJQ12913 1337 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms